ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8065339	CSC1-like protein At3g21620
sbi-r.1	8075448	calcium permeable stress-gated cation channel 1
sbi-r.1	8055122	CSC1-like protein At1g32090
zma-u.5	103637742	CSC1-like protein
zma-u.5	103651635	calcium permeable stress-gated cation channel 1-like
zma-u.5	103649511	calcium permeable stress-gated cation channel 1
osa-u.5	4326412	calcium permeable stress-gated cation channel 1
osa-u.5	4339808	calcium permeable stress-gated cation channel 1
tae-r.2	123186632	CSC1-like protein At3g21620
tae-r.2	123179932	CSC1-like protein At3g21620
hvu-r.1	123443645	calcium permeable stress-gated cation channel 1-like
hvu-r.1	123441134	CSC1-like protein At3g21620
bdi-r.1	100826233	CSC1-like protein At3g21620
bdi-r.1	100842875	CSC1-like protein At1g32090
ath-u.5	AT1G62320	ERD (early-responsive to dehydration stress) family protein
ath-u.5	AT1G32090	early-responsive to dehydration stress protein (ERD4)
gma-u.5	100784781	calcium permeable stress-gated cation channel 1
gma-u.5	100790932	calcium permeable stress-gated cation channel 1
gma-u.5	100798474	CSC1-like protein At4g02900
sly-u.5	101245814	calcium permeable stress-gated cation channel 1
sly-u.5	101248892	CSC1-like protein At3g21620
sly-u.5	101249476	CSC1-like protein At1g32090
bra-r.6	103859757	calcium permeable stress-gated cation channel 1
bra-r.6	103872041	CSC1-like protein At1g11960
bra-r.6	103870897	CSC1-like protein At4g15430
vvi-u.5	100241369	CSC1-like protein At3g21620
vvi-u.5	100257332	calcium permeable stress-gated cation channel 1
ppo-u.5	18094094	CSC1-like protein At1g32090
ppo-u.5	7491890	CSC1-like protein At1g32090
ppo-u.5	18097335	calcium permeable stress-gated cation channel 1
mtr-u.5	11432872	CSC1-like protein At3g21620
mtr-u.5	11411106	CSC1-like protein At1g32090
ghi-r.1	107925181	calcium permeable stress-gated cation channel 1
ghi-r.1	107924638	CSC1-like protein At4g02900
ghi-r.1	107923140	CSC1-like protein At3g21620
bna-r.1	125583667	protein OSCA1
bna-r.1	106451746	CSC1-like protein At1g32090
bna-r.1	106450744	CSC1-like protein At1g11960
sot-r.1	102601348	CSC1-like protein At3g21620
sot-r.1	102604750	calcium permeable stress-gated cation channel 1-like
sot-r.1	102600603	CSC1-like protein At4g02900
cit-r.1	102625734	CSC1-like protein At4g02900
cit-r.1	102622510	CSC1-like protein At3g21620
cit-r.1	102618085	hypothetical protein
nta-r.1	107765419	hyperosmolality-gated Ca2+ permeable channel 1.7-like
nta-r.1	107776665	hyperosmolality-gated Ca2+ permeable channel 1.7
nta-r.1	107783514	hyperosmolality-gated Ca2+ permeable channel 1.2
cre-r.1	CHLRE_09g399912v5	uncharacterized protein
cre-r.1	CHLRE_08g360500v5	uncharacterized protein
cre-r.1	CHLRE_08g360564v5	uncharacterized protein

Top 50 coexpressed genes to 8065339 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8065339 (sbi-r.1 coexpression data)

CoexMap"8065339"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(952 genes)

IEA

GO MF

GO:0005227 [list] [network] calcium-activated cation channel activity

(11 genes)

IEA

Protein

XP_002440380.1 [sequence] [blastp]
XP_021303015.1 [sequence] [blastp]
XP_021303016.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, cyto 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2	(predict for XP_002440380.1)
plas 4, cyto 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2	(predict for XP_021303015.1)
plas 6, chlo 2, cyto 1	(predict for XP_021303016.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_002440380.1)
scret 9	(predict for XP_021303015.1)
scret 9	(predict for XP_021303016.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8065339	sbi-r.1 for 8075448	sbi-r.1 for 8055122	zma-u.5 for 103637742	zma-u.5 for 103651635	zma-u.5 for 103649511	osa-u.5 for 4326412	osa-u.5 for 4339808	tae-r.2 for 123186632	tae-r.2 for 123179932	hvu-r.1 for 123443645	hvu-r.1 for 123441134	bdi-r.1 for 100826233	bdi-r.1 for 100842875	ath-u.5 for AT1G62320	ath-u.5 for AT1G32090	gma-u.5 for 100784781	gma-u.5 for 100790932	gma-u.5 for 100798474	sly-u.5 for 101245814	sly-u.5 for 101248892	sly-u.5 for 101249476	bra-r.6 for 103859757	bra-r.6 for 103872041	bra-r.6 for 103870897	vvi-u.5 for 100241369	vvi-u.5 for 100257332	ppo-u.5 for 18094094	ppo-u.5 for 7491890	ppo-u.5 for 18097335	mtr-u.5 for 11432872	mtr-u.5 for 11411106	ghi-r.1 for 107925181	ghi-r.1 for 107924638	ghi-r.1 for 107923140	bna-r.1 for 125583667	bna-r.1 for 106451746	bna-r.1 for 106450744	sot-r.1 for 102601348	sot-r.1 for 102604750	sot-r.1 for 102600603	cit-r.1 for 102625734	cit-r.1 for 102622510	cit-r.1 for 102618085	nta-r.1 for 107765419	nta-r.1 for 107776665	nta-r.1 for 107783514	cre-r.1 for CHLRE_09g399912v5	cre-r.1 for CHLRE_08g360500v5	cre-r.1 for CHLRE_08g360564v5

Ortholog

Ortholog ID: 385

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

CSC1-like protein At3g21620

CSC1-like protein At1g32090

calcium permeable stress-gated cation channel 1-like

CSC1-like protein At4g02900

uncharacterized LOC100281102

calcium permeable stress-gated cation channel 1

CSC1-like protein At1g32090

CSC1-like protein At4g02900

CSC1-like protein At3g21620

CSC1-like protein At1g32090

ERD (early-responsive to dehydration stress) family protein

CSC1-like protein At4g02900

CSC1-like protein At1g32090

calcium permeable stress-gated cation channel 1

CSC1-like protein At4g02900

calcium permeable stress-gated cation channel 1

CSC1-like protein At1g11960

calcium permeable stress-gated cation channel 1

CSC1-like protein At1g32090

CSC1-like protein At3g21620

CSC1-like protein At1g32090

calcium permeable stress-gated cation channel 1

CSC1-like protein At1g32090

CSC1-like protein At4g15430

calcium permeable stress-gated cation channel 1

CSC1-like protein At3g21620

CSC1-like protein At4g02900

CSC1-like protein At1g32090

CSC1-like protein At4g02900

CSC1-like protein At3g21620

CSC1-like protein At1g32090

hyperosmolality-gated Ca2+ permeable channel 1.8-like

hyperosmolality-gated Ca2+ permeable channel 1.5

hyperosmolality-gated Ca2+ permeable channel 1.7-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00900	Terpenoid backbone biosynthesis	2
sbi04712	Circadian rhythm - plant	2
sbi00561	Glycerolipid metabolism	2
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	5
zma00562	Inositol phosphate metabolism	2
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	4
bdi04145	Phagosome	4
bdi00230	Purine metabolism	2
bdi03050	Proteasome	2
bdi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	3
gma04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00100	Steroid biosynthesis	2
sot00561	Glycerolipid metabolism	2
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta00909	Sesquiterpenoid and triterpenoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

8065339

8055122

103651635

103630383

100281102

4326412

4349511

123050782

123436852

123426348

100826233

100842875

842530

837748

827214

100798474

100818689

100500239

101245814

101250627

103859757

103872041

100257332

100263040

18094094

7491890

7489888

11411106

11446419

107905909

107958289

107946795

106406663

106358785

106366987

102601348

102600603

102589464

102625734

102622510

102613628

107810099

107813181

107831861

5720683

5727852

5727851

The preparation time of this page was 0.2 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	2	2	2	2	3	3	3	2	3	2	3	3	3	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8065339 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8065339 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**