ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8065342	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
sbi-r.1	8084179	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
sbi-r.1	8071559	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
sbi-r.1	110431654	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
zma-u.5	103652819	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
zma-u.5	100279272	uncharacterized LOC100279272
zma-u.5	100383797	uncharacterized LOC100383797
osa-u.5	4342345	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
osa-u.5	4332141	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
osa-u.5	9266544	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
tae-r.2	123044977	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
tae-r.2	123052895	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
tae-r.2	123096229	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
hvu-r.1	123452865	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
hvu-r.1	123452447	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
hvu-r.1	123449238	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
bdi-r.1	100827326	leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1
bdi-r.1	100839339	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
bdi-r.1	100841261	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
ath-u.5	BAM2	Leucine-rich receptor-like protein kinase family protein
ath-u.5	BAM3	Leucine-rich receptor-like protein kinase family protein
ath-u.5	BAM1	Leucine-rich receptor-like protein kinase family protein
gma-u.5	102664073	leucine-rich repeat receptor-like kinase protein CLV1a
gma-u.5	100777902	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
gma-u.5	100816158	leucine-rich repeat receptor-like kinase
sly-u.5	101267452	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
sly-u.5	CLV1	receptor protein kinase CLAVATA1
sly-u.5	101264597	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
bra-r.6	103832028	receptor protein kinase CLAVATA1
bra-r.6	103874010	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
vvi-u.5	100258232	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
vvi-u.5	100855393	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
vvi-u.5	100260741	receptor protein kinase CLAVATA1
ppo-u.5	7493980	receptor protein kinase CLAVATA1
ppo-u.5	7465545	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
mtr-u.5	11408427	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
mtr-u.5	11424811	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
mtr-u.5	11427330	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	107938533	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	107908530	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	107905518	receptor protein kinase CLAVATA1
bna-r.1	106405823	receptor protein kinase CLAVATA1-like
bna-r.1	125596580	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
bna-r.1	106421630	receptor protein kinase CLAVATA1
sot-r.1	102580156	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
sot-r.1	102583999	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
sot-r.1	102585300	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
cit-r.1	102610563	receptor protein kinase CLAVATA1
cit-r.1	102612034	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
cit-r.1	102618381	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
nta-r.1	107765200	uncharacterized LOC107765200
nta-r.1	107824761	uncharacterized LOC107824761
nta-r.1	107819666	uncharacterized LOC107819666

Top 50 coexpressed genes to 8065342 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8065342 (sbi-r.1 coexpression data)

CoexMap"8065342"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1208 genes)

IEA

GO CC

GO MF

GO:0033612 [list] [network] receptor serine/threonine kinase binding	(42 genes)	IEA
GO:0004672 [list] [network] protein kinase activity	(1237 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2084 genes)	IEA

Protein

XP_002441645.1 [sequence] [blastp]
XP_021302841.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 1, golg 1	(predict for XP_002441645.1)
plas 4, golg_plas 4, golg 1, vacu 1, E.R. 1, E.R._vacu 1	(predict for XP_021302841.1)

Subcellular
localization
TargetP

scret 8	(predict for XP_002441645.1)
scret 8	(predict for XP_021302841.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8065342	sbi-r.1 for 8084179	sbi-r.1 for 8071559	sbi-r.1 for 110431654	zma-u.5 for 103652819	zma-u.5 for 100279272	zma-u.5 for 100383797	osa-u.5 for 4342345	osa-u.5 for 4332141	osa-u.5 for 9266544	tae-r.2 for 123044977	tae-r.2 for 123052895	tae-r.2 for 123096229	hvu-r.1 for 123452865	hvu-r.1 for 123452447	hvu-r.1 for 123449238	bdi-r.1 for 100827326	bdi-r.1 for 100839339	bdi-r.1 for 100841261	ath-u.5 for BAM2	ath-u.5 for BAM3	ath-u.5 for BAM1	gma-u.5 for 102664073	gma-u.5 for 100777902	gma-u.5 for 100816158	sly-u.5 for 101267452	sly-u.5 for CLV1	sly-u.5 for 101264597	bra-r.6 for 103832028	bra-r.6 for 103874010	vvi-u.5 for 100258232	vvi-u.5 for 100855393	vvi-u.5 for 100260741	ppo-u.5 for 7493980	ppo-u.5 for 7465545	mtr-u.5 for 11408427	mtr-u.5 for 11424811	mtr-u.5 for 11427330	ghi-r.1 for 107938533	ghi-r.1 for 107908530	ghi-r.1 for 107905518	bna-r.1 for 106405823	bna-r.1 for 125596580	bna-r.1 for 106421630	sot-r.1 for 102580156	sot-r.1 for 102583999	sot-r.1 for 102585300	cit-r.1 for 102610563	cit-r.1 for 102612034	cit-r.1 for 102618381	nta-r.1 for 107765200	nta-r.1 for 107824761	nta-r.1 for 107819666

Ortholog

Ortholog ID: 450

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

BAM2

BAM3

BAM1

LOC100803075

RLK1

RLK3

Function^*

leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3

leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1