ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-r.7	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.9	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-e.2	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.4.bio	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.4.hor	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.4.lig	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.4.str	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-m.4.tis	BAM1	Leucine-rich receptor-like protein kinase family protein
ath-u.5	BAM2	Leucine-rich receptor-like protein kinase family protein
ath-u.5	BAM3	Leucine-rich receptor-like protein kinase family protein
ath-u.5	CLV1	Leucine-rich receptor-like protein kinase family protein
gma-u.5	100803075	CLE-related protein RLK3
gma-u.5	100815103	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
gma-u.5	100816158	leucine-rich repeat receptor-like kinase
vvi-u.5	100855393	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
vvi-u.5	100258232	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
vvi-u.5	100260741	receptor protein kinase CLAVATA1
ppo-u.5	7491457	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ppo-u.5	7493980	receptor protein kinase CLAVATA1
mtr-u.5	11424811	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
mtr-u.5	11408427	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
mtr-u.5	25490539	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
sly-u.5	101248733	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like
sly-u.5	101267452	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
sly-u.5	CLV1	receptor protein kinase CLAVATA1
osa-u.5	4334273	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
osa-u.5	9268663	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
osa-u.5	9266544	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
zma-u.5	103644083	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
zma-u.5	100279272	uncharacterized LOC100279272
zma-u.5	100272700	putative leucine-rich repeat receptor-like protein kinase family protein

Top 50 coexpressed genes to BAM1 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BAM1 (ath-u.5 coexpression data)

CoexMap"836699"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010480 [list] [network] microsporocyte differentiation	(2 genes)	IGI
GO:0009934 [list] [network] regulation of meristem structural organization	(22 genes)	IGI
GO:0010075 [list] [network] regulation of meristem growth	(75 genes)	IGI
GO:0048653 [list] [network] anther development	(81 genes)	IGI
GO:0048437 [list] [network] floral organ development	(274 genes)	IGI
GO:0048229 [list] [network] gametophyte development	(505 genes)	IGI

GO CC

GO:0005886 [list] [network] plasma membrane

(2598 genes)

HDA ISM

GO MF

GO:0033612 [list] [network] receptor serine/threonine kinase binding	(72 genes)	IPI
GO:0042802 [list] [network] identical protein binding	(414 genes)	IPI
GO:0016301 [list] [network] kinase activity	(1055 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_001190624.1 [sequence] [blastp]
NP_201371.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, E.R. 1, chlo 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_001190624.1)
plas 7, E.R. 1, chlo 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_201371.1)

Subcellular
localization
TargetP

scret 2	(predict for NP_001190624.1)
scret 2	(predict for NP_201371.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for BAM1 .	ath-r.7 for BAM1 .	ath-m.9 for BAM1 .	ath-e.2 for BAM1 .	ath-m.4.bio for BAM1 .	ath-m.4.hor for BAM1 .	ath-m.4.lig for BAM1 .	ath-m.4.str for BAM1 .	ath-m.4.tis for BAM1 .	ath-u.5 for BAM2 .	ath-u.5 for BAM3 .	ath-u.5 for CLV1 .	gma-u.5 for 100803075 .	gma-u.5 for 100815103 .	gma-u.5 for 100816158 .	vvi-u.5 for 100855393 .	vvi-u.5 for 100258232 .	vvi-u.5 for 100260741 .	ppo-u.5 for 7491457 .	ppo-u.5 for 7493980 .	mtr-u.5 for 11424811 .	mtr-u.5 for 11408427 .	mtr-u.5 for 25490539 .	sly-u.5 for 101248733 .	sly-u.5 for 101267452 .	sly-u.5 for CLV1 .	osa-u.5 for 4334273 .	osa-u.5 for 9268663 .	osa-u.5 for 9266544 .	zma-u.5 for 103644083 .	zma-u.5 for 100279272 .	zma-u.5 for 100272700 .

Ortholog

Ortholog ID: 450

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

BAM2

BAM1

RLK1

Function^*

Leucine-rich receptor-like protein kinase family protein

CLE-related protein RLK3

receptor-like protein kinase 1

leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3