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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8068396   tRNA 2'-phosphotransferase 1 
 zma-u.5   100273223   RNA 2'-phosphotransferase Tpt1 / KptA family 
 zma-u.5   100194044   40S ribosomal protein S20 
 osa-u.5   9267091   uncharacterized LOC9267091 
 tae-r.2   123077035   tRNA 2'-phosphotransferase 1 
 tae-r.2   123088167   tRNA 2'-phosphotransferase 1 
 tae-r.2   123119298   tRNA 2'-phosphotransferase 1 
 hvu-r.1   123411376   tRNA 2'-phosphotransferase 1-like 
 bdi-r.1   100838114   tRNA 2'-phosphotransferase 1 
 ath-u.5   emb1067   RNA 2'-phosphotransferase, Tpt1 / KptA family 
 gma-u.5   100805163   tRNA 2'-phosphotransferase 1 
 gma-u.5   100795797   tRNA 2'-phosphotransferase 1-like 
 sly-u.5   101250158   uncharacterized LOC101250158 
 bra-r.6   103866869   tRNA 2'-phosphotransferase 1 
 vvi-u.5   100245349   uncharacterized LOC100245349 
 ppo-u.5   7477755   uncharacterized LOC7477755 
 ppo-u.5   7472650   uncharacterized LOC7472650 
 mtr-u.5   11435035   tRNA 2'-phosphotransferase 1 
 mtr-u.5   25493000   tRNA 2'-phosphotransferase 1 
 ghi-r.1   107942990   tRNA 2'-phosphotransferase 1 
 ghi-r.1   107944117   tRNA 2'-phosphotransferase 1 
 bna-r.1   125609585   tRNA 2'-phosphotransferase 1-like 
 bna-r.1   106396108   tRNA 2'-phosphotransferase 1 
 bna-r.1   106450908   tRNA 2'-phosphotransferase 1-like 
 sot-r.1   102600248   tRNA 2'-phosphotransferase 1-like 
 cit-r.1   102609292   uncharacterized LOC102609292 
 nta-r.1   107773662   uncharacterized LOC107773662 
 nta-r.1   107788943   uncharacterized LOC107788943 
 nta-r.1   107808788   uncharacterized LOC107808788 
 cre-r.1   CHLRE_03g193250v5   uncharacterized protein 

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Top 50 coexpressed genes to 8068396 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068396 (sbi-r.1 coexpression data)

CoexMap""


sbiLOC8068396 | Entrez gene ID : 8068396    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 3 1 1 1 2 1 1 1 2 2 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function tRNA 2'-phosphotransferase 1
KEGG
GO BP
GO:0006388 [list] [network] tRNA splicing, via endonucleolytic cleavage and ligation  (6 genes)  IEA  
GO CC
GO MF
GO:0000215 [list] [network] tRNA 2'-phosphotransferase activity  (1 genes)  IEA  
Protein XP_002437766.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_002437766.2)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_002437766.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8068396
zma-u.5
for
100273223
zma-u.5
for
100194044
osa-u.5
for
9267091
tae-r.2
for
123077035
tae-r.2
for
123088167
tae-r.2
for
123119298
hvu-r.1
for
123411376
bdi-r.1
for
100838114
ath-u.5
for
emb1067
gma-u.5
for
100805163
gma-u.5
for
100795797
sly-u.5
for
101250158
bra-r.6
for
103866869
vvi-u.5
for
100245349
ppo-u.5
for
7477755
ppo-u.5
for
7472650
mtr-u.5
for
11435035
mtr-u.5
for
25493000
ghi-r.1
for
107942990
ghi-r.1
for
107944117
bna-r.1
for
125609585
bna-r.1
for
106396108
bna-r.1
for
106450908
sot-r.1
for
102600248
cit-r.1
for
102609292
nta-r.1
for
107773662
nta-r.1
for
107788943
nta-r.1
for
107808788
cre-r.1
for
CHLRE_03g193250v5

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Ortholog ID: 3215
Species sbi zma zma osa tae tae hvu bdi ath gma gma sly bra vvi ppo ppo mtr mtr ghi bna bna sot cit nta nta nta cre
Symbol LOC8068396 LOC100273223 LOC100194044 LOC9267091 LOC123088167 LOC123190590 LOC123411376 LOC100838114 emb1067 LOC100805163 LOC100795797 LOC101250158 LOC103866869 LOC100245349 LOC7477755 LOC7472650 LOC11435035 LOC25493000 LOC107932478 LOC125609585 LOC106396108 LOC102600248 LOC102609292 LOC107773662 LOC107788943 LOC107808788 CHLRE_03g193250v5
Function* tRNA 2'-phosphotransferase 1 RNA 2'-phosphotransferase Tpt1 / KptA family 40S ribosomal protein S20 uncharacterized LOC9267091 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like tRNA 2'-phosphotransferase 1 RNA 2'-phosphotransferase, Tpt1 / KptA family tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like uncharacterized LOC101250158 tRNA 2'-phosphotransferase 1 uncharacterized LOC100245349 uncharacterized LOC7477755 uncharacterized LOC7472650 tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1 putative tRNA 2'-phosphotransferase tRNA 2'-phosphotransferase 1-like tRNA 2'-phosphotransferase 1 tRNA 2'-phosphotransferase 1-like uncharacterized LOC102609292 uncharacterized LOC107773662 uncharacterized LOC107788943 uncharacterized LOC107808788 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8068396 100273223 100194044 9267091 123088167 123190590 123411376 100838114 819141 100805163 100795797 101250158 103866869 100245349 7477755 7472650 11435035 25493000 107932478 125609585 106396108 102600248 102609292 107773662 107788943 107808788 66052952
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