ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8069245	coiled-coil domain-containing protein 12
zma-u.5	100273359	uncharacterized LOC100273359
osa-u.5	4342149	uncharacterized LOC4342149
tae-r.2	123168709	coiled-coil domain-containing protein 12
tae-r.2	123161672	coiled-coil domain-containing protein 12
hvu-r.1	123411357	coiled-coil domain-containing protein 12
bdi-r.1	100830291	coiled-coil domain-containing protein 12
ath-u.5	AT3G05070	Cwf18 pre-mRNA splicing factor
gma-u.5	100527227	uncharacterized LOC100527227
gma-u.5	100306131	cwf18 domain-containing protein
sly-u.5	101249091	uncharacterized LOC101249091
vvi-u.5	100244142	uncharacterized LOC100244142
ppo-u.5	7494376	uncharacterized LOC7494376
mtr-u.5	25484545	coiled-coil domain-containing protein 12
ghi-r.1	107942765	coiled-coil domain-containing protein 12
ghi-r.1	107957362	coiled-coil domain-containing protein 12
bna-r.1	106453064	coiled-coil domain-containing protein 12
bna-r.1	106453020	coiled-coil domain-containing protein 12
sot-r.1	102599152	coiled-coil domain-containing protein 12
nta-r.1	107765741	uncharacterized LOC107765741
nta-r.1	107763359	uncharacterized LOC107763359
cre-r.1	CHLRE_12g518300v5	uncharacterized protein

Annotation

functional annotation

KEGG

sbi03040 [list] [network] Spliceosome (208 genes)

GO BP

GO CC

GO:0071014 [list] [network] post-mRNA release spliceosomal complex	(12 genes)	IEA
GO:0005684 [list] [network] U2-type spliceosomal complex	(46 genes)	IEA

GO MF

Protein

XP_002437648.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, nucl 4

(predict for XP_002437648.1)

Subcellular
localization
TargetP

other 5, mito 4

(predict for XP_002437648.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8069245	zma-u.5 for 100273359	osa-u.5 for 4342149	tae-r.2 for 123168709	tae-r.2 for 123161672	hvu-r.1 for 123411357	bdi-r.1 for 100830291	ath-u.5 for AT3G05070	gma-u.5 for 100527227	gma-u.5 for 100306131	sly-u.5 for 101249091	vvi-u.5 for 100244142	ppo-u.5 for 7494376	mtr-u.5 for 25484545	ghi-r.1 for 107942765	ghi-r.1 for 107957362	bna-r.1 for 106453064	bna-r.1 for 106453020	sot-r.1 for 102599152	nta-r.1 for 107765741	nta-r.1 for 107763359	cre-r.1 for CHLRE_12g518300v5

Ortholog

Ortholog ID: 8925

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

nta

cre

Symbol

Function^*

coiled-coil domain-containing protein 12

uncharacterized LOC100273359

uncharacterized LOC4342149

coiled-coil domain-containing protein 12

Cwf18 pre-mRNA splicing factor

uncharacterized LOC100527227

cwf18 domain-containing protein

uncharacterized LOC101249091

uncharacterized LOC100244142

uncharacterized LOC7494376

coiled-coil domain-containing protein 12

uncharacterized LOC107765741

uncharacterized LOC107763359

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03050	Proteasome	3
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03020	RNA polymerase	3
zma03420	Nucleotide excision repair	3
zma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	7
osa03040	Spliceosome	5
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03020	RNA polymerase	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	7
gma03050	Proteasome	6
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3
mtr03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	8
ghi03010	Ribosome	4
ghi05100	Bacterial invasion of epithelial cells	3
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	7
ghi03010	Ribosome	4
ghi05100	Bacterial invasion of epithelial cells	3
ghi03022	Basal transcription factors	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03018	RNA degradation	2
bna03040	Spliceosome	2
bna00230	Purine metabolism	2
bna00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	6
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03013	Nucleocytoplasmic transport	3
nta03010	Ribosome	3
nta03082	ATP-dependent chromatin remodeling	2
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03020	RNA polymerase	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	14
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

8069245

100273359

4342149

123161672

123411357

100830291

819669

100527227

100306131

101249091

100244142

7494376

25484545

107942765

107957362

106453064

106453020

102599152

107765741

107763359

5722629

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8069245 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8069245 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	nta	cre	bra	cit
Paralog	1	1	1	2	1	1	1	2	1	1	1	1	2	2	1	2	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8069245 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8069245 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**