Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8069245   coiled-coil domain-containing protein 12 
 zma-u.5   100273359   uncharacterized LOC100273359 
 osa-u.5   4342149   uncharacterized LOC4342149 
 ath-u.5   AT3G05070   Cwf18 pre-mRNA splicing factor 
 gma-u.5   100527227   uncharacterized LOC100527227 
 gma-u.5   100306131   cwf18 domain-containing protein 
 sly-u.5   101249091   uncharacterized LOC101249091 
 vvi-u.5   100244142   uncharacterized LOC100244142 
 ppo-u.5   7494376   uncharacterized LOC7494376 
 mtr-u.5   25484545   coiled-coil domain-containing protein 12 

close


Top 50 coexpressed genes to 8069245 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8069245 (sbi-r.1 coexpression data)

CoexMap"8069245"


sbiLOC8069245 | Entrez gene ID : 8069245      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO CC
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IEA  
GO:0005684 [list] [network] U2-type spliceosomal complex  (46 genes)  IEA  
GO MF
Protein XP_002437648.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  nucl 4  (predict for XP_002437648.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_002437648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8069245

.
zma-u.5
for
100273359

.
osa-u.5
for
4342149

.
ath-u.5
for
AT3G05070

.
gma-u.5
for
100527227

.
gma-u.5
for
100306131

.
sly-u.5
for
101249091

.
vvi-u.5
for
100244142

.
ppo-u.5
for
7494376

.
mtr-u.5
for
25484545

.


Ortholog ID: 8925
Species ath gma gma sly osa zma vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot bdi nta nta
Symbol AT3G05070 LOC100527227 LOC100306131 LOC101249091 LOC4342149 LOC100273359 LOC100244142 LOC7494376 LOC25484545 LOC123161672 LOC123411357 LOC107942765 LOC107957362 LOC106453020 LOC106453064 CHLRE_12g518300v5 LOC8069245 LOC102599152 LOC100830291 LOC107763359 LOC107765741
Function* Cwf18 pre-mRNA splicing factor uncharacterized LOC100527227 cwf18 domain-containing protein uncharacterized LOC101249091 uncharacterized LOC4342149 uncharacterized LOC100273359 uncharacterized LOC100244142 uncharacterized LOC7494376 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 uncharacterized protein coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 coiled-coil domain-containing protein 12 uncharacterized LOC107763359 uncharacterized LOC107765741
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03050 Proteasome 6
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 7
osa03040 Spliceosome 5
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 3
zma03420 Nucleotide excision repair 3
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
ghi05100 Bacterial invasion of epithelial cells 3
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi05100 Bacterial invasion of epithelial cells 3
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03018 RNA degradation 2
bna03040 Spliceosome 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 14
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03050 Proteasome 3
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
nta03010 Ribosome 3
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819669 100527227 100306131 101249091 4342149 100273359 100244142 7494376 25484545 123161672 123411357 107942765 107957362 106453020 106453064 5722629 8069245 102599152 100830291 107763359 107765741
The preparation time of this page was 0.1 [sec].