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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8069484   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 zma-u.5   103642614   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   103635902   CRM-domain containing factor CFM9, mitochondrial 
 osa-u.5   4337792   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123180422   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123039425   CRM-domain containing factor CFM9, mitochondrial 
 tae-r.2   123111580   CRM-domain containing factor CFM9, mitochondrial 
 hvu-r.1   123424723   CRM-domain containing factor CFM9, mitochondrial 
 bdi-r.1   100832553   CRM-domain containing factor CFM3, chloroplastic/mitochondrial 
 ath-u.5   AT3G27550   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100780131   CRM-domain containing factor CFM9, mitochondrial 
 gma-u.5   100782246   CRM-domain containing factor CFM9, mitochondrial 
 sly-u.5   101262328   CRM-domain containing factor CFM9, mitochondrial 
 bra-r.6   103875207   CRM-domain containing factor CFM9, mitochondrial 
 bra-r.6   103854225   CRM-domain containing factor CFM9, mitochondrial 
 vvi-u.5   100254349   CRM-domain containing factor CFM9, mitochondrial 
 ppo-u.5   7467646   CRM-domain containing factor CFM9, mitochondrial 
 mtr-u.5   25495115   CRM-domain containing factor CFM9, mitochondrial 
 ghi-r.1   107897905   CRM-domain containing factor CFM9, mitochondrial 
 ghi-r.1   107926099   CRM-domain containing factor CFM9, mitochondrial 
 bna-r.1   106407264   CRM-domain containing factor CFM9, mitochondrial-like 
 bna-r.1   106401786   CRM-domain containing factor CFM9, mitochondrial 
 bna-r.1   106382131   CRM-domain containing factor CFM9, mitochondrial-like 
 sot-r.1   102595407   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 cit-r.1   102613713   CRM-domain containing factor CFM9, mitochondrial 
 nta-r.1   107782624   CRM-domain containing factor CFM9, mitochondrial 
 nta-r.1   107780414   CRM-domain containing factor CFM9, mitochondrial 
 nta-r.1   107772164   uncharacterized LOC107772164 

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Top 50 coexpressed genes to 8069484 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8069484 (sbi-r.1 coexpression data)

CoexMap"8069484"


sbiLOC8069484 | Entrez gene ID : 8069484      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002439268.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  nucl 3,  mito 1  (predict for XP_002439268.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002439268.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8069484
zma-u.5
for
103642614
zma-u.5
for
103635902
osa-u.5
for
4337792
tae-r.2
for
123180422
tae-r.2
for
123039425
tae-r.2
for
123111580
hvu-r.1
for
123424723
bdi-r.1
for
100832553
ath-u.5
for
AT3G27550
gma-u.5
for
100780131
gma-u.5
for
100782246
sly-u.5
for
101262328
bra-r.6
for
103875207
bra-r.6
for
103854225
vvi-u.5
for
100254349
ppo-u.5
for
7467646
mtr-u.5
for
25495115
ghi-r.1
for
107897905
ghi-r.1
for
107926099
bna-r.1
for
106407264
bna-r.1
for
106401786
bna-r.1
for
106382131
sot-r.1
for
102595407
cit-r.1
for
102613713
nta-r.1
for
107782624
nta-r.1
for
107780414
nta-r.1
for
107772164


Ortholog ID: 8033
Species sbi zma zma osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta nta
Symbol LOC8069484 LOC103642614 LOC103635902 LOC4337792 LOC123180422 LOC123039425 LOC123111580 LOC123424723 LOC100832553 AT3G27550 LOC100780131 LOC100782246 LOC101262328 LOC103875207 LOC103854225 LOC100254349 LOC7467646 LOC25495115 LOC107897905 LOC107926099 LOC106407264 LOC106382131 LOC125589743 LOC102595407 LOC102613713 LOC107782624 LOC107780414 LOC107772164
Function* CRM-domain containing factor CFM3, chloroplastic/mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial RNA-binding CRS1 / YhbY (CRM) domain protein CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial-like CRM-domain containing factor CFM9, mitochondrial-like CRM-domain containing factor CFM9, mitochondrial-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial uncharacterized LOC107772164
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03018 RNA degradation 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8069484 103642614 103635902 4337792 123180422 123039425 123111580 123424723 100832553 822377 100780131 100782246 101262328 103875207 103854225 100254349 7467646 25495115 107897905 107926099 106407264 106382131 125589743 102595407 102613713 107782624 107780414 107772164
The preparation time of this page was 3.7 [sec].