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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467646   CRM-domain containing factor CFM9, mitochondrial 
 ppo-r.4   7467646   CRM-domain containing factor CFM9, mitochondrial 
 ppo-m.4   7467646   CRM-domain containing factor CFM9, mitochondrial 
 gma-u.5   100780131   CRM-domain containing factor CFM9, mitochondrial 
 gma-u.5   100782246   CRM-domain containing factor CFM9, mitochondrial 
 mtr-u.5   25495115   CRM-domain containing factor CFM9, mitochondrial 
 ath-u.5   AT3G27550   RNA-binding CRS1 / YhbY (CRM) domain protein 
 vvi-u.5   100254349   CRM-domain containing factor CFM9, mitochondrial 
 sly-u.5   101262328   CRM-domain containing factor CFM9, mitochondrial 
 osa-u.5   4337792   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   103642614   CRM-domain containing factor CFM9, mitochondrial 
 zma-u.5   103635902   CRM-domain containing factor CFM9, mitochondrial 

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Top 50 coexpressed genes to 7467646 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467646 (ppo-u.5 coexpression data)

CoexMap"7467646"


ppoLOC7467646 | Entrez gene ID : 7467646    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_024455679.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_024455679.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_024455679.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467646

.
ppo-r.4
for
7467646

.
ppo-m.4
for
7467646

.
gma-u.5
for
100780131

.
gma-u.5
for
100782246

.
mtr-u.5
for
25495115

.
ath-u.5
for
AT3G27550

.
vvi-u.5
for
100254349

.
sly-u.5
for
101262328

.
osa-u.5
for
4337792

.
zma-u.5
for
103642614

.
zma-u.5
for
103635902

.


Ortholog ID: 8033
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G27550 LOC100780131 LOC100782246 LOC101262328 LOC4337792 LOC103635902 LOC103642614 LOC103875207 LOC103854225 LOC100254349 LOC7467646 LOC25495115 LOC123180422 LOC123111580 LOC123424723 LOC107897905 LOC107926099 LOC106382131 LOC106407264 LOC8069484 LOC102595407 LOC102613713 LOC100832553 LOC107772164 LOC107780414
Function* RNA-binding CRS1 / YhbY (CRM) domain protein CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM9, mitochondrial-like CRM-domain containing factor CFM9, mitochondrial-like CRM-domain containing factor CFM3, chloroplastic/mitochondrial uncharacterized CRM domain-containing protein At3g25440, chloroplastic CRM-domain containing factor CFM9, mitochondrial CRM-domain containing factor CFM3, chloroplastic/mitochondrial uncharacterized LOC107772164 CRM-domain containing factor CFM9, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03018 RNA degradation 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822377 100780131 100782246 101262328 4337792 103635902 103642614 103875207 103854225 100254349 7467646 25495115 123180422 123111580 123424723 107897905 107926099 106382131 106407264 8069484 102595407 102613713 100832553 107772164 107780414
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