ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8071069	uncharacterized LOC8071069
sbi-r.1	8071067	uncharacterized LOC8071067
sbi-r.1	8071066	uncharacterized LOC8071066
sbi-r.1	8071072	uncharacterized LOC8071072
zma-u.5	100502301	uncharacterized LOC100502301
zma-u.5	100279111	uncharacterized LOC100279111
zma-u.5	100275085	uncharacterized LOC100275085
osa-u.5	4330359	FCS-Like Zinc finger 3
osa-u.5	4336797	FCS-Like Zinc finger 1
osa-u.5	4336795	FCS-Like Zinc finger 3
tae-r.2	123046679	FCS-Like Zinc finger 1-like
tae-r.2	123042062	FCS-Like Zinc finger 2-like
hvu-r.1	123427859	FCS-Like Zinc finger 2-like
hvu-r.1	123430820	FCS-Like Zinc finger 1-like
hvu-r.1	123427857	FCS-Like Zinc finger 2-like
bdi-r.1	100821368	uncharacterized LOC100821368
bdi-r.1	100821672	uncharacterized LOC100821672
bdi-r.1	100822298	uncharacterized LOC100822298
ath-u.5	AT2G44670	senescence-associated family protein (DUF581)
gma-u.5	100499981	FCS-like zinc-finger domain-containing protein
gma-u.5	100788024	uncharacterized LOC100788024
gma-u.5	100306220	FCS-like zinc-finger domain-containing protein
sly-u.5	101246541	FCS-Like Zinc finger 1-like
bra-r.6	103858138	FCS-Like Zinc finger 3
bra-r.6	103866822	FCS-Like Zinc finger 3
bra-r.6	103866151	FCS-Like Zinc finger 3
vvi-u.5	100264994	FCS-Like Zinc finger 3
ppo-u.5	7483810	FCS-Like Zinc finger 3
ppo-u.5	18105109	FCS-Like Zinc finger 3
mtr-u.5	11419880	FCS-Like Zinc finger 3
ghi-r.1	107953735	FCS-Like Zinc finger 3
ghi-r.1	107916073	FCS-Like Zinc finger 3
ghi-r.1	107923389	FCS-Like Zinc finger 3
bna-r.1	BNAC04G05070D	FCS-Like Zinc finger 3
bna-r.1	BNAA05G04220D	FCS-Like Zinc finger 3
bna-r.1	BNAC08G30470D	FCS-Like Zinc finger 3
sot-r.1	102588165	uncharacterized LOC102588165
sot-r.1	102600983	uncharacterized LOC102600983
cit-r.1	102616612	FCS-Like Zinc finger 3
nta-r.1	107823756	FCS-Like Zinc finger 3
nta-r.1	107830550	FCS-Like Zinc finger 3
nta-r.1	107764627	FCS-Like Zinc finger 3

Top 50 coexpressed genes to 8071069 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8071069 (sbi-r.1 coexpression data)

CoexMap"8071069"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1596 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding

(824 genes)

IEA

Protein

XP_002448414.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, mito 3, chlo 1, cyto_mito 1, mito_plas 1

(predict for XP_002448414.1)

Subcellular
localization
TargetP

scret 4, other 3

(predict for XP_002448414.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8071069	sbi-r.1 for 8071067	sbi-r.1 for 8071066	sbi-r.1 for 8071072	zma-u.5 for 100502301	zma-u.5 for 100279111	zma-u.5 for 100275085	osa-u.5 for 4330359	osa-u.5 for 4336797	osa-u.5 for 4336795	tae-r.2 for 123046679	tae-r.2 for 123042062	hvu-r.1 for 123427859	hvu-r.1 for 123430820	hvu-r.1 for 123427857	bdi-r.1 for 100821368	bdi-r.1 for 100821672	bdi-r.1 for 100822298	ath-u.5 for AT2G44670	gma-u.5 for 100499981	gma-u.5 for 100788024	gma-u.5 for 100306220	sly-u.5 for 101246541	bra-r.6 for 103858138	bra-r.6 for 103866822	bra-r.6 for 103866151	vvi-u.5 for 100264994	ppo-u.5 for 7483810	ppo-u.5 for 18105109	mtr-u.5 for 11419880	ghi-r.1 for 107953735	ghi-r.1 for 107916073	ghi-r.1 for 107923389	bna-r.1 for BNAC04G05070D	bna-r.1 for BNAA05G04220D	bna-r.1 for BNAC08G30470D	sot-r.1 for 102588165	sot-r.1 for 102600983	cit-r.1 for 102616612	nta-r.1 for 107823756	nta-r.1 for 107830550	nta-r.1 for 107764627

Ortholog

Ortholog ID: 602

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8071066

uncharacterized LOC8078391

uncharacterized LOC8057710

uncharacterized LOC100502301

uncharacterized LOC100279111

uncharacterized LOC100278820

FCS-Like Zinc finger 3

FCS-Like Zinc finger 2

FCS-Like Zinc finger 1

FCS-Like Zinc finger 3

FCS-Like Zinc finger 2

FCS-Like Zinc finger 2-like

FCS-Like Zinc finger 1-like

uncharacterized LOC100821368

uncharacterized LOC100822298

uncharacterized LOC100822608

senescence-associated family protein (DUF581)

FCS-like zinc-finger domain-containing protein

uncharacterized LOC100788024

FCS-like zinc-finger domain-containing protein

FCS-Like Zinc finger 1-like

FCS-Like Zinc finger 3

uncharacterized LOC102588165

uncharacterized LOC102600983

FCS-Like Zinc finger 3

FCS-Like Zinc finger 3-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00062	Fatty acid elongation	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	3
bra00230	Purine metabolism	2
bra00920	Sulfur metabolism	2
bra01320	Sulfur cycle	2
bra00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bra00941	Flavonoid biosynthesis	2
bra00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00966	Glucosinolate biosynthesis	3
bra00500	Starch and sucrose metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2
ppo01210	2-Oxocarboxylic acid metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3
cit04145	Phagosome	2
cit04148	Efferocytosis	2
cit04517	IgSF CAM signaling	2
cit04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8071066

8078391

8057710

100502301

100279111

100278820

4330359

4336795

4336796

123042048

123042049

123042050

123427859

123427857

123427858

100821368

100822298

100822608

819075

100499981

100788024

100306220

101246541

103866822

103866151

103841874

100264994

7483810

18105109

11419880

107953735

107916073

107916063

106450780

106413881

106429207

102588165

102600983

102616612

107823756

107830550

107785344

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	2	3	3	1	3	1	3	1	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8071069 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8071069 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**