ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT2G44670	senescence-associated family protein (DUF581)
ath-r.7	AT2G44670	senescence-associated family protein (DUF581)
ath-m.9	AT2G44670	senescence-associated family protein (DUF581)
ath-e.2	AT2G44670	senescence-associated family protein (DUF581)
ath-m.4.bio	AT2G44670	senescence-associated family protein (DUF581)
ath-m.4.hor	AT2G44670	senescence-associated family protein (DUF581)
ath-m.4.lig	AT2G44670	senescence-associated family protein (DUF581)
ath-m.4.str	AT2G44670	senescence-associated family protein (DUF581)
ath-m.4.tis	AT2G44670	senescence-associated family protein (DUF581)
bra-r.6	103841874	FCS-Like Zinc finger 3
bra-r.6	103858138	FCS-Like Zinc finger 3
bra-r.6	103866151	FCS-Like Zinc finger 3
bna-r.1	BNAC04G05070D	FCS-Like Zinc finger 3
bna-r.1	BNAC03G24900D	FCS-Like Zinc finger 3
bna-r.1	106391794	FCS-Like Zinc finger 3-like
ghi-r.1	107950810	FCS-Like Zinc finger 3
ghi-r.1	107911853	FCS-Like Zinc finger 3
ghi-r.1	107916063	FCS-Like Zinc finger 3
cit-r.1	102616612	FCS-Like Zinc finger 3
gma-u.5	100788024	uncharacterized LOC100788024
gma-u.5	100499981	FCS-like zinc-finger domain-containing protein
gma-u.5	100306220	FCS-like zinc-finger domain-containing protein
vvi-u.5	100264994	FCS-Like Zinc finger 3
ppo-u.5	7483810	FCS-Like Zinc finger 3
ppo-u.5	18105109	FCS-Like Zinc finger 3
mtr-u.5	11419880	FCS-Like Zinc finger 3
sly-u.5	101246541	FCS-Like Zinc finger 1-like
sot-r.1	102600983	uncharacterized LOC102600983
sot-r.1	102588165	uncharacterized LOC102588165
nta-r.1	107785344	FCS-Like Zinc finger 3-like
nta-r.1	107830550	FCS-Like Zinc finger 3
nta-r.1	107823756	FCS-Like Zinc finger 3
osa-u.5	4330359	FCS-Like Zinc finger 3
osa-u.5	4336795	FCS-Like Zinc finger 3
osa-u.5	4336797	FCS-Like Zinc finger 1
zma-u.5	100277698	OSJNBa0013K16.15-like protein
zma-u.5	100278490	uncharacterized LOC100278490
zma-u.5	100278632	FCS-Like Zinc finger 1
hvu-r.1	123427859	FCS-Like Zinc finger 2-like
hvu-r.1	123430820	FCS-Like Zinc finger 1-like
hvu-r.1	123427857	FCS-Like Zinc finger 2-like
sbi-r.1	8071067	uncharacterized LOC8071067
sbi-r.1	8071066	uncharacterized LOC8071066
sbi-r.1	8057710	uncharacterized LOC8057710
bdi-r.1	100822608	uncharacterized LOC100822608
bdi-r.1	100822402	uncharacterized LOC100822402
bdi-r.1	100822298	uncharacterized LOC100822298

Top 50 coexpressed genes to AT2G44670 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT2G44670 (ath-u.5 coexpression data)

CoexMap"819075"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0009646 [list] [network] response to absence of light	(58 genes)	IEP
GO:0042594 [list] [network] response to starvation	(246 genes)	IEP

GO CC

GO:0005829 [list] [network] cytosol	(2593 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	IDA

GO MF

GO:0019900 [list] [network] kinase binding	(112 genes)	IPI
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_566023.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 1, cyto 1, mito 1, extr 1, cyto_nucl 1

(predict for NP_566023.1)

Subcellular
localization
TargetP

other 5

(predict for NP_566023.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G44670	ath-r.7 for AT2G44670	ath-m.9 for AT2G44670	ath-e.2 for AT2G44670	ath-m.4.bio for AT2G44670	ath-m.4.hor for AT2G44670	ath-m.4.lig for AT2G44670	ath-m.4.str for AT2G44670	ath-m.4.tis for AT2G44670	bra-r.6 for 103841874	bra-r.6 for 103858138	bra-r.6 for 103866151	bna-r.1 for BNAC04G05070D	bna-r.1 for BNAC03G24900D	bna-r.1 for 106391794	ghi-r.1 for 107950810	ghi-r.1 for 107911853	ghi-r.1 for 107916063	cit-r.1 for 102616612	gma-u.5 for 100788024	gma-u.5 for 100499981	gma-u.5 for 100306220	vvi-u.5 for 100264994	ppo-u.5 for 7483810	ppo-u.5 for 18105109	mtr-u.5 for 11419880	sly-u.5 for 101246541	sot-r.1 for 102600983	sot-r.1 for 102588165	nta-r.1 for 107785344	nta-r.1 for 107830550	nta-r.1 for 107823756	osa-u.5 for 4330359	osa-u.5 for 4336795	osa-u.5 for 4336797	zma-u.5 for 100277698	zma-u.5 for 100278490	zma-u.5 for 100278632	hvu-r.1 for 123427859	hvu-r.1 for 123430820	hvu-r.1 for 123427857	sbi-r.1 for 8071067	sbi-r.1 for 8071066	sbi-r.1 for 8057710	bdi-r.1 for 100822608	bdi-r.1 for 100822402	bdi-r.1 for 100822298

Ortholog

Ortholog ID: 602

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

senescence-associated family protein (DUF581)

FCS-Like Zinc finger 3

uncharacterized LOC100788024

FCS-like zinc-finger domain-containing protein

FCS-Like Zinc finger 3

FCS-Like Zinc finger 1-like

uncharacterized LOC102600983

uncharacterized LOC102588165

FCS-Like Zinc finger 3-like

FCS-Like Zinc finger 3

FCS-Like Zinc finger 2

uncharacterized LOC100278820

uncharacterized LOC100279111

uncharacterized LOC100502301

FCS-Like Zinc finger 1

FCS-Like Zinc finger 3

FCS-Like Zinc finger 2

FCS-Like Zinc finger 2-like

FCS-Like Zinc finger 1-like

uncharacterized LOC8071066

uncharacterized LOC8057710

uncharacterized LOC8078391

uncharacterized LOC100822608

uncharacterized LOC100822298

uncharacterized LOC100821368

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00966	Glucosinolate biosynthesis	3
bra00500	Starch and sucrose metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bra00941	Flavonoid biosynthesis	2
bra00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	3
bra00230	Purine metabolism	2
bra00920	Sulfur metabolism	2
bra01320	Sulfur cycle	2
bra00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3
cit04145	Phagosome	2
cit04148	Efferocytosis	2
cit04517	IgSF CAM signaling	2
cit04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3
gma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2
ppo01210	2-Oxocarboxylic acid metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00062	Fatty acid elongation	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

819075

103841874

103866151

103866822

106413881

106429207

106450780

107916063

107916073

107953735

102616612

100788024

100499981

100306220

100264994

7483810

18105109

11419880

101246541

102600983

102588165

107785344

107830550

107823756

4330359

4336795

4336796

100278820

100279111

100502301

123042048

123042049

123042050

123427859

123427857

123427858

8071066

8057710

8078391

100822608

100822298

100821368

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	hvu	sbi	bdi	cre	tae
Paralog	9	3	3	3	1	3	1	2	1	1	2	3	3	3	3	3	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G44670 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G44670 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**