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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072276   growth-regulating factor 3 
 sbi-r.1   8081935   growth-regulating factor 1 
 sbi-r.1   8073168   growth-regulating factor 4 
 sbi-r.1   8070748   growth-regulating factor 2 
 zma-u.5   100125644   Growth-regulating factor 6 
 zma-u.5   100125641   growth-regulating factor 7-like 
 zma-u.5   100101539   growth-regulating factor 6-like 
 osa-u.5   4339928   growth-regulating factor 5-like 
 osa-u.5   4336879   growth-regulating factor 3-like 
 osa-u.5   4330903   growth-regulating factor 1-like 
 tae-r.2   123128605   growth-regulating factor 1 
 tae-r.2   123128103   growth-regulating factor 4 
 tae-r.2   123088276   growth-regulating factor 5 
 hvu-r.1   123404808   growth-regulating factor 4-like 
 hvu-r.1   123408772   growth-regulating factor 5-like 
 bdi-r.1   100836260   growth-regulating factor 4 
 bdi-r.1   100833962   growth-regulating factor 3 
 bdi-r.1   100842886   growth-regulating factor 5 
 ath-u.5   GRF5   growth-regulating factor 5 
 gma-u.5   GRF16   growth-regulating factor 
 gma-u.5   GRF7   growth-regulating factor 
 gma-u.5   GRF17   growth-regulating factor 
 sly-u.5   101267047   growth-regulating factor 4-like 
 sly-u.5   101263989   growth-regulating factor 4 
 sly-u.5   101255511   growth-regulating factor 6-like 
 bra-r.6   103870079   growth-regulating factor 5 
 vvi-u.5   100259737   growth-regulating factor 4 
 vvi-u.5   100247998   growth-regulating factor 1 
 mtr-u.5   25479294   growth-regulating factor 4 
 mtr-u.5   25486490   growth-regulating factor 1 
 mtr-u.5   25494182   growth-regulating factor 1 
 ghi-r.1   107893357   growth-regulating factor 6 
 ghi-r.1   107897434   growth-regulating factor 5 
 ghi-r.1   107907106   growth-regulating factor 1 
 bna-r.1   106381127   growth-regulating factor 5-like 
 bna-r.1   106389165   growth-regulating factor 5-like 
 sot-r.1   102591630   growth-regulating factor 4-like 
 sot-r.1   102580024   growth-regulating factor 4-like 
 sot-r.1   102601897   growth-regulating factor 1 
 cit-r.1   102611455   growth-regulating factor 4-like 
 cit-r.1   102612529   growth-regulating factor 6 
 cit-r.1   102627866   growth-regulating factor 4-like 
 nta-r.1   107799160   growth-regulating factor 4 
 nta-r.1   107825286   growth-regulating factor 4-like 
 nta-r.1   107821683   growth-regulating factor 4-like 

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Top 50 coexpressed genes to 8072276 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072276 (sbi-r.1 coexpression data)

CoexMap"8072276"


sbiLOC8072276 | Entrez gene ID : 8072276      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi mtr ghi bna sot cit nta ppo cre
Paralog 4 3 3 3 2 3 1 3 3 1 2 3 3 2 3 3 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (215 genes)  IEA  
GO:0032502 [list] [network] developmental process  (309 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002448459.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002448459.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_002448459.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072276
sbi-r.1
for
8081935
sbi-r.1
for
8073168
sbi-r.1
for
8070748
zma-u.5
for
100125644
zma-u.5
for
100125641
zma-u.5
for
100101539
osa-u.5
for
4339928
osa-u.5
for
4336879
osa-u.5
for
4330903
tae-r.2
for
123128605
tae-r.2
for
123128103
tae-r.2
for
123088276
hvu-r.1
for
123404808
hvu-r.1
for
123408772
bdi-r.1
for
100836260
bdi-r.1
for
100833962
bdi-r.1
for
100842886
ath-u.5
for
GRF5
gma-u.5
for
GRF16
gma-u.5
for
GRF7
gma-u.5
for
GRF17
sly-u.5
for
101267047
sly-u.5
for
101263989
sly-u.5
for
101255511
bra-r.6
for
103870079
vvi-u.5
for
100259737
vvi-u.5
for
100247998
mtr-u.5
for
25479294
mtr-u.5
for
25486490
mtr-u.5
for
25494182
ghi-r.1
for
107893357
ghi-r.1
for
107897434
ghi-r.1
for
107907106
bna-r.1
for
106381127
bna-r.1
for
106389165
sot-r.1
for
102591630
sot-r.1
for
102580024
sot-r.1
for
102601897
cit-r.1
for
102611455
cit-r.1
for
102612529
cit-r.1
for
102627866
nta-r.1
for
107799160
nta-r.1
for
107825286
nta-r.1
for
107821683


Ortholog ID: 673
Species sbi sbi sbi zma zma zma osa osa tae tae tae hvu hvu bdi bdi bdi ath gma gma gma sly sly sly bra vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC8072276 LOC8081935 LOC8070748 LOC100101536 GRF1 LOC103627811 LOC4330903 LOC4330436 LOC123128605 LOC123128103 LOC123166486 LOC123404808 LOC123408772 LOC100836260 LOC100842886 LOC100845697 GRF5 GRF11 GRF13 GRF15 LOC101267047 LOC101263989 LOC101255511 LOC103870079 LOC100259737 LOC100247998 LOC18094082 LOC25479294 LOC25486490 LOC11429462 LOC107950614 LOC107951879 LOC107958784 LOC106381127 LOC111207183 LOC102591630 LOC102580024 LOC102601897 LOC102612529 LOC102627866 LOC107177665 LOC107821683 LOC107772772 LOC107812877
Function* growth-regulating factor 3 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor 3-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 5-like growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 4-like growth-regulating factor 4 growth-regulating factor 6-like growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5-like growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 6 growth-regulating factor 4-like growth-regulating factor 5 growth-regulating factor 4-like growth-regulating factor 3-like growth-regulating factor 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
hvu04070 Phosphatidylinositol signaling system 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8072276 8081935 8070748 100101536 100101535 103627811 4330903 4330436 123128605 123128103 123166486 123404808 123408772 100836260 100842886 100845697 820609 100787567 100787226 100781613 101267047 101263989 101255511 103870079 100259737 100247998 18094082 25479294 25486490 11429462 107950614 107951879 107958784 106381127 111207183 102591630 102580024 102601897 102612529 102627866 107177665 107821683 107772772 107812877
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