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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102627866   growth-regulating factor 4-like 
 cit-r.1   102612529   growth-regulating factor 6 
 cit-r.1   107177665   growth-regulating factor 5 
 cit-r.1   102611455   growth-regulating factor 4-like 
 ath-u.5   GRF5   growth-regulating factor 5 
 bra-r.6   103870079   growth-regulating factor 5 
 ghi-r.1   107893357   growth-regulating factor 6 
 ghi-r.1   107897434   growth-regulating factor 5 
 ghi-r.1   107907106   growth-regulating factor 1 
 bna-r.1   111207183   growth-regulating factor 5 
 bna-r.1   106448590   growth-regulating factor 5 
 gma-u.5   GRF16   growth-regulating factor 
 gma-u.5   GRF7   growth-regulating factor 
 gma-u.5   GRF17   growth-regulating factor 
 vvi-u.5   100259737   growth-regulating factor 4 
 vvi-u.5   100247998   growth-regulating factor 1 
 ppo-u.5   18094082   growth-regulating factor 4 
 ppo-u.5   18096998   growth-regulating factor 5 
 mtr-u.5   25479294   growth-regulating factor 4 
 mtr-u.5   25486490   growth-regulating factor 1 
 mtr-u.5   11429462   growth-regulating factor 5 
 sly-u.5   101245679   growth-regulating factor 4-like 
 sly-u.5   101255511   growth-regulating factor 6-like 
 sly-u.5   101263989   growth-regulating factor 4 
 sot-r.1   102601897   growth-regulating factor 1 
 sot-r.1   102584254   growth-regulating factor 4-like 
 sot-r.1   102580024   growth-regulating factor 4-like 
 nta-r.1   107774428   growth-regulating factor 1-like 
 nta-r.1   107825286   growth-regulating factor 4-like 
 nta-r.1   107816694   growth-regulating factor 1-like 
 osa-u.5   4330436   growth-regulating factor 4-like 
 osa-u.5   4330903   growth-regulating factor 1-like 
 osa-u.5   4336879   growth-regulating factor 3-like 
 zma-u.5   103627811   growth-regulating factor 1-like 
 zma-u.5   100125641   growth-regulating factor 7-like 
 zma-u.5   100125644   Growth-regulating factor 6 
 tae-r.2   123149787   growth-regulating factor 5 
 tae-r.2   123157195   growth-regulating factor 2 
 tae-r.2   123169214   growth-regulating factor 2 
 hvu-r.1   123427726   growth-regulating factor 3-like 
 hvu-r.1   123403172   growth-regulating factor 1-like 
 hvu-r.1   123408772   growth-regulating factor 5-like 
 sbi-r.1   8081935   growth-regulating factor 1 
 sbi-r.1   8066917   growth-regulating factor 5 
 sbi-r.1   8072276   growth-regulating factor 3 
 bdi-r.1   100845697   growth-regulating factor 1 
 bdi-r.1   100835287   growth-regulating factor 2 
 bdi-r.1   100833962   growth-regulating factor 3 

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Top 50 coexpressed genes to 102627866 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102627866 (cit-r.1 coexpression data)

CoexMap"102627866"


citLOC102627866 | Entrez gene ID : 102627866    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 2 3 2 2 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (196 genes)  IEA  
GO:0032502 [list] [network] developmental process  (275 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1325 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006484684.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006484684.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006484684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102627866
cit-r.1
for
102612529
cit-r.1
for
107177665
cit-r.1
for
102611455
ath-u.5
for
GRF5
bra-r.6
for
103870079
ghi-r.1
for
107893357
ghi-r.1
for
107897434
ghi-r.1
for
107907106
bna-r.1
for
111207183
bna-r.1
for
106448590
gma-u.5
for
GRF16
gma-u.5
for
GRF7
gma-u.5
for
GRF17
vvi-u.5
for
100259737
vvi-u.5
for
100247998
ppo-u.5
for
18094082
ppo-u.5
for
18096998
mtr-u.5
for
25479294
mtr-u.5
for
25486490
mtr-u.5
for
11429462
sly-u.5
for
101245679
sly-u.5
for
101255511
sly-u.5
for
101263989
sot-r.1
for
102601897
sot-r.1
for
102584254
sot-r.1
for
102580024
nta-r.1
for
107774428
nta-r.1
for
107825286
nta-r.1
for
107816694
osa-u.5
for
4330436
osa-u.5
for
4330903
osa-u.5
for
4336879
zma-u.5
for
103627811
zma-u.5
for
100125641
zma-u.5
for
100125644
tae-r.2
for
123149787
tae-r.2
for
123157195
tae-r.2
for
123169214
hvu-r.1
for
123427726
hvu-r.1
for
123403172
hvu-r.1
for
123408772
sbi-r.1
for
8081935
sbi-r.1
for
8066917
sbi-r.1
for
8072276
bdi-r.1
for
100845697
bdi-r.1
for
100835287
bdi-r.1
for
100833962


Ortholog ID: 673
Species cit cit cit ath bra ghi ghi ghi bna bna gma gma gma vvi vvi ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC102627866 LOC102612529 LOC107177665 GRF5 LOC103870079 LOC107950614 LOC107951879 LOC107958784 LOC111207183 LOC106381127 GRF11 GRF13 GRF15 LOC100259737 LOC100247998 LOC18094082 LOC25479294 LOC25486490 LOC11429462 LOC101255511 LOC101263989 LOC101267047 LOC102601897 LOC102580024 LOC102591630 LOC107812877 LOC107821683 LOC107772772 LOC4330436 LOC4330903 LOC103627811 LOC100101536 GRF1 LOC123166486 LOC123128605 LOC123128103 LOC123408772 LOC123404808 LOC8081935 LOC8072276 LOC8070748 LOC100845697 LOC100836260 LOC100842886
Function* growth-regulating factor 4-like growth-regulating factor 6 growth-regulating factor 5 growth-regulating factor 5 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 5-like growth-regulating factor growth-regulating factor growth-regulating factor growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 6-like growth-regulating factor 4 growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 4 growth-regulating factor 4-like growth-regulating factor 3-like growth-regulating factor 4-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 3-like growth-regulating factor 1-like growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5-like growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 3 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
hvu04070 Phosphatidylinositol signaling system 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627866 102612529 107177665 820609 103870079 107950614 107951879 107958784 111207183 106381127 100787567 100787226 100781613 100259737 100247998 18094082 25479294 25486490 11429462 101255511 101263989 101267047 102601897 102580024 102591630 107812877 107821683 107772772 4330436 4330903 103627811 100101536 100101535 123166486 123128605 123128103 123408772 123404808 8081935 8072276 8070748 100845697 100836260 100842886
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