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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   107177665   growth-regulating factor 5 
 ath-u.5   GRF5   growth-regulating factor 5 
 gma-u.5   GRF16   growth-regulating factor 
 gma-u.5   GRF7   growth-regulating factor 
 gma-u.5   GRF17   growth-regulating factor 
 vvi-u.5   100259737   growth-regulating factor 4 
 vvi-u.5   100247998   growth-regulating factor 1 
 ppo-u.5   18094082   growth-regulating factor 4 
 ppo-u.5   18096998   growth-regulating factor 5 
 mtr-u.5   25479294   growth-regulating factor 4 
 mtr-u.5   11429462   growth-regulating factor 5 
 mtr-u.5   25486490   growth-regulating factor 1 
 sly-u.5   101245679   growth-regulating factor 4-like 
 sly-u.5   101255511   growth-regulating factor 6-like 
 sly-u.5   101263989   growth-regulating factor 4 
 osa-u.5   4330436   growth-regulating factor 4-like 
 osa-u.5   4330903   growth-regulating factor 1-like 
 osa-u.5   4336879   growth-regulating factor 3-like 
 zma-u.5   103627811   growth-regulating factor 1-like 
 zma-u.5   100125641   growth-regulating factor 7-like 
 zma-u.5   100125644   Growth-regulating factor 6 

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Top 50 coexpressed genes to 107177665 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107177665 (cit-r.1 coexpression data)

CoexMap"107177665"


citLOC107177665 | Entrez gene ID : 107177665    
Species cit ath gma vvi ppo mtr sly osa zma hvu bna bra ghi sbi bdi nta tae cre sot
Paralog 1 1 3 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (196 genes)  IEA  
GO:0032502 [list] [network] developmental process  (275 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1325 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_024951039.2 [sequence] [blastp]
XP_024951041.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024951039.2)
nucl 10  (predict for XP_024951041.2)
Subcellular
localization
TargetP
other 7  (predict for XP_024951039.2)
other 7  (predict for XP_024951041.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
107177665
ath-u.5
for
GRF5
gma-u.5
for
GRF16
gma-u.5
for
GRF7
gma-u.5
for
GRF17
vvi-u.5
for
100259737
vvi-u.5
for
100247998
ppo-u.5
for
18094082
ppo-u.5
for
18096998
mtr-u.5
for
25479294
mtr-u.5
for
11429462
mtr-u.5
for
25486490
sly-u.5
for
101245679
sly-u.5
for
101255511
sly-u.5
for
101263989
osa-u.5
for
4330436
osa-u.5
for
4330903
osa-u.5
for
4336879
zma-u.5
for
103627811
zma-u.5
for
100125641
zma-u.5
for
100125644


Ortholog ID: 673
Species cit cit ath ghi ghi bna bna gma gma vvi ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC102627866 LOC102612529 GRF5 LOC107958784 LOC107951879 LOC111207183 LOC106381127 GRF13 GRF15 LOC100259737 LOC18094082 LOC11429462 LOC25479294 LOC101255511 LOC101267047 LOC102580024 LOC102591630 LOC107812877 LOC107772772 LOC4330903 LOC103627811 GRF1 LOC123166486 LOC123128605 LOC123404808 LOC8081935 LOC8072276 LOC100845697 LOC100842886
Function* growth-regulating factor 4-like growth-regulating factor 6 growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 5-like growth-regulating factor growth-regulating factor growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 6-like growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 4 growth-regulating factor 3-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 3 growth-regulating factor 1 growth-regulating factor 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627866 102612529 820609 107958784 107951879 111207183 106381127 100787226 100781613 100259737 18094082 11429462 25479294 101255511 101267047 102580024 102591630 107812877 107772772 4330903 103627811 100101535 123166486 123128605 123404808 8081935 8072276 100845697 100842886
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