ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8074162	protein NLP1
sbi-r.1	8085681	protein NLP1
sbi-r.1	8057535	protein NLP3
sbi-r.1	8060198	protein NLP2
zma-u.5	100278991	uncharacterized LOC100278991
zma-u.5	100285205	NIN-like protein 1
zma-u.5	100381753	uncharacterized LOC100381753
osa-u.5	9268032	protein NLP1-like
osa-u.5	4327787	protein NLP3-like
osa-u.5	4350238	protein NLP2-like
tae-r.2	123053765	protein NLP2
tae-r.2	123060841	protein NLP3
tae-r.2	123123553	protein NLP4
hvu-r.1	123447816	protein NLP2-like
hvu-r.1	123399284	uncharacterized LOC123399284
bdi-r.1	104585443	protein NLP2
bdi-r.1	100845720	protein NLP2
bdi-r.1	100824282	protein NLP3
ath-u.5	AT2G17150	Plant regulator RWP-RK family protein
ath-u.5	AT1G76350	Plant regulator RWP-RK family protein
ath-u.5	AT1G64530	Plant regulator RWP-RK family protein
gma-u.5	100793770	protein NLP9
gma-u.5	100792100	protein NODULE INCEPTION 2a
gma-u.5	100790922	protein NLP4
sly-u.5	101247739	protein NLP6-like
sly-u.5	101256430	protein NLP2
sly-u.5	101260397	protein NLP9
bra-r.6	103830221	protein NLP9
bra-r.6	103829610	protein NLP2
bra-r.6	103829417	protein NLP4
vvi-u.5	100263398	protein NLP6
vvi-u.5	100262961	protein NLP9
vvi-u.5	100258191	protein NLP4-like
ppo-u.5	7469575	protein NLP9
ppo-u.5	112324761	protein NLP8
ppo-u.5	7496857	protein NLP4
mtr-u.5	11422046	protein NLP9
mtr-u.5	11421786	protein NLP5
mtr-u.5	25490310	protein NLP4
ghi-r.1	107927456	protein NLP9
ghi-r.1	107925447	protein NLP2
ghi-r.1	107922567	protein NLP4
bna-r.1	106348132	protein NLP2
bna-r.1	106424026	protein NLP8-like
bna-r.1	106353148	protein NLP9-like
sot-r.1	102601351	protein NLP6-like
sot-r.1	102596781	protein NLP9-like
sot-r.1	102602337	protein NLP9-like
cit-r.1	102617751	protein NLP4
cit-r.1	102616132	protein NLP2
cit-r.1	102611491	protein NLP9-like
nta-r.1	107824854	protein NLP6
nta-r.1	107828483	protein NLP9
nta-r.1	107799923	protein NLP6
cre-r.1	CHLRE_03g177700v5	uncharacterized protein

Top 50 coexpressed genes to 8074162 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8074162 (sbi-r.1 coexpression data)

CoexMap"8074162"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1111 genes)	IEA
GO:0005515 [list] [network] protein binding	(4172 genes)	IEA

Protein

XP_021309543.1 [sequence] [blastp]
XP_021309544.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_021309543.1)
nucl 9	(predict for XP_021309544.1)

Subcellular
localization
TargetP

other 8	(predict for XP_021309543.1)
other 8	(predict for XP_021309544.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8074162	sbi-r.1 for 8085681	sbi-r.1 for 8057535	sbi-r.1 for 8060198	zma-u.5 for 100278991	zma-u.5 for 100285205	zma-u.5 for 100381753	osa-u.5 for 9268032	osa-u.5 for 4327787	osa-u.5 for 4350238	tae-r.2 for 123053765	tae-r.2 for 123060841	tae-r.2 for 123123553	hvu-r.1 for 123447816	hvu-r.1 for 123399284	bdi-r.1 for 104585443	bdi-r.1 for 100845720	bdi-r.1 for 100824282	ath-u.5 for AT2G17150	ath-u.5 for AT1G76350	ath-u.5 for AT1G64530	gma-u.5 for 100793770	gma-u.5 for 100792100	gma-u.5 for 100790922	sly-u.5 for 101247739	sly-u.5 for 101256430	sly-u.5 for 101260397	bra-r.6 for 103830221	bra-r.6 for 103829610	bra-r.6 for 103829417	vvi-u.5 for 100263398	vvi-u.5 for 100262961	vvi-u.5 for 100258191	ppo-u.5 for 7469575	ppo-u.5 for 112324761	ppo-u.5 for 7496857	mtr-u.5 for 11422046	mtr-u.5 for 11421786	mtr-u.5 for 25490310	ghi-r.1 for 107927456	ghi-r.1 for 107925447	ghi-r.1 for 107922567	bna-r.1 for 106348132	bna-r.1 for 106424026	bna-r.1 for 106353148	sot-r.1 for 102601351	sot-r.1 for 102596781	sot-r.1 for 102602337	cit-r.1 for 102617751	cit-r.1 for 102616132	cit-r.1 for 102611491	nta-r.1 for 107824854	nta-r.1 for 107828483	nta-r.1 for 107799923	cre-r.1 for CHLRE_03g177700v5

Ortholog

Ortholog ID: 230

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

NINA

Function^*

protein NLP1

protein NLP2

NIN-like protein 1

uncharacterized LOC100381753

protein NLP2

protein NLP1-like

protein NLP2-like

protein NLP3-like

protein NLP3

protein NLP1

protein NLP2

protein NLP2-like

protein NLP2

protein NLP3

protein NLP1

Plant regulator RWP-RK family protein

protein NODULE INCEPTION 2a

protein NODULE INCEPTION 1a

protein NLP7

protein NLP9

protein NLP7-like

protein NLP9-like

protein NLP5

protein NLP4

protein NLP8

protein NLP9

protein NLP4-like

protein NLP4

protein NLP9

protein NLP7

protein NLP5

protein NLP9

protein NLP7

protein NLP2

protein NLP6

protein NLP5

protein NLP4-like

protein NLP9-like

protein NLP4

protein NLP2

protein NLP4

protein NLP2

protein NLP9-like

protein NLP9

protein NLP6-like

protein NLP9

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae00040	Pentose and glucuronate interconversions	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00710	Carbon fixation by Calvin cycle	3
ppo01200	Carbon metabolism	3
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8074162

8085681

8060198

100285205

100381753

103646273

9268032

4350238

4328230

123077913

123105806

123045891

123447816

123427118

100845720

100844863

100825769

842761

825127

818951

100792100

100787220

100797708

101260397

101261639

101246738

103832092

103872852

103866723

100262961

100258191

100253057

7469575

7477839

11421786

11423270

25479714

107908608

107931923

107951378

106406403

106440730

106411272

102602337

102599232

102598698

102617751

102616132

102611491

107828483

107790861

107779869

5728827

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Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	2	3	3	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8074162 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8074162 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**