ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100262961	protein NLP9
vvi-r.5	100262961	protein NLP9
vvi-m.5	100262961	protein NLP9
vvi-u.5	100253057	protein NLP4
vvi-u.5	100258191	protein NLP4-like
vvi-u.5	100263398	protein NLP6
ath-u.5	AT2G17150	Plant regulator RWP-RK family protein
ath-u.5	AT1G76350	Plant regulator RWP-RK family protein
ath-u.5	AT1G64530	Plant regulator RWP-RK family protein
gma-u.5	100790922	protein NLP4
gma-u.5	100786118	protein NLP6
gma-u.5	100785821	protein NLP6
bra-r.6	103874190	protein NLP1
bra-r.6	103829610	protein NLP2
bra-r.6	103829417	protein NLP4
ppo-u.5	7485639	protein NLP5
mtr-u.5	25479714	protein NLP7
mtr-u.5	11423270	protein NLP9
mtr-u.5	11421138	protein NLP6
ghi-r.1	107914635	protein NLP9
ghi-r.1	107911355	protein NLP6
ghi-r.1	107910288	protein NLP8
bna-r.1	106402843	protein NLP9
bna-r.1	106375260	protein NLP2-like
bna-r.1	106376006	protein NLP7-like
cit-r.1	102616132	protein NLP2
cit-r.1	102623162	protein NLP7
cit-r.1	102617751	protein NLP4
sly-u.5	101256430	protein NLP2
sly-u.5	101246738	protein NLP9-like
sly-u.5	101260397	protein NLP9
sot-r.1	102581207	protein NLP7-like
sot-r.1	102596781	protein NLP9-like
sot-r.1	102599232	protein NLP4
nta-r.1	107779869	protein NLP9
nta-r.1	107828483	protein NLP9
nta-r.1	107824854	protein NLP6
osa-u.5	9268032	protein NLP1-like
osa-u.5	4328230	protein NLP3-like
osa-u.5	4331508	protein NLP1-like
zma-u.5	100383982	uncharacterized LOC100383982
zma-u.5	103649534	uncharacterized LOC103649534
zma-u.5	103635017	protein NLP3
tae-r.2	123045891	protein NLP2
tae-r.2	123077913	protein NLP3
tae-r.2	123053765	protein NLP2
hvu-r.1	123443291	protein NLP3
hvu-r.1	123399284	uncharacterized LOC123399284
hvu-r.1	123447816	protein NLP2-like
sbi-r.1	8085681	protein NLP1
sbi-r.1	8074162	protein NLP1
sbi-r.1	8077550	protein NLP3
bdi-r.1	100826804	protein NLP1
bdi-r.1	100825769	protein NLP1
bdi-r.1	100824282	protein NLP3
cre-r.1	CHLRE_03g177700v5	uncharacterized protein

Top 50 coexpressed genes to 100262961 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100262961 (vvi-u.5 coexpression data)

CoexMap"100262961"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(925 genes)	IEA
GO:0005515 [list] [network] protein binding	(4232 genes)	IEA

Protein

XP_010650663.1 [sequence] [blastp]
XP_010650664.1 [sequence] [blastp]
XP_010650665.1 [sequence] [blastp]
XP_010650666.1 [sequence] [blastp]
XP_010650667.1 [sequence] [blastp]
XP_059593167.1 [sequence] [blastp]
XP_059593168.1 [sequence] [blastp]
XP_059593169.1 [sequence] [blastp]
XP_059593170.1 [sequence] [blastp]
XP_059593171.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_010650663.1)
nucl 9	(predict for XP_010650664.1)
nucl 9	(predict for XP_010650665.1)
nucl 9	(predict for XP_010650666.1)
nucl 9	(predict for XP_010650667.1)
nucl 9	(predict for XP_059593167.1)
nucl 9	(predict for XP_059593168.1)
nucl 9	(predict for XP_059593169.1)
nucl 9	(predict for XP_059593170.1)
nucl 9	(predict for XP_059593171.1)

Subcellular
localization
TargetP

other 8	(predict for XP_010650663.1)
other 8	(predict for XP_010650664.1)
other 8	(predict for XP_010650665.1)
other 8	(predict for XP_010650666.1)
other 8	(predict for XP_010650667.1)
other 7	(predict for XP_059593167.1)
other 7	(predict for XP_059593168.1)
other 7	(predict for XP_059593169.1)
other 7	(predict for XP_059593170.1)
other 8	(predict for XP_059593171.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100262961	vvi-r.5 for 100262961	vvi-m.5 for 100262961	vvi-u.5 for 100253057	vvi-u.5 for 100258191	vvi-u.5 for 100263398	ath-u.5 for AT2G17150	ath-u.5 for AT1G76350	ath-u.5 for AT1G64530	gma-u.5 for 100790922	gma-u.5 for 100786118	gma-u.5 for 100785821	bra-r.6 for 103874190	bra-r.6 for 103829610	bra-r.6 for 103829417	ppo-u.5 for 7485639	mtr-u.5 for 25479714	mtr-u.5 for 11423270	mtr-u.5 for 11421138	ghi-r.1 for 107914635	ghi-r.1 for 107911355	ghi-r.1 for 107910288	bna-r.1 for 106402843	bna-r.1 for 106375260	bna-r.1 for 106376006	cit-r.1 for 102616132	cit-r.1 for 102623162	cit-r.1 for 102617751	sly-u.5 for 101256430	sly-u.5 for 101246738	sly-u.5 for 101260397	sot-r.1 for 102581207	sot-r.1 for 102596781	sot-r.1 for 102599232	nta-r.1 for 107779869	nta-r.1 for 107828483	nta-r.1 for 107824854	osa-u.5 for 9268032	osa-u.5 for 4328230	osa-u.5 for 4331508	zma-u.5 for 100383982	zma-u.5 for 103649534	zma-u.5 for 103635017	tae-r.2 for 123045891	tae-r.2 for 123077913	tae-r.2 for 123053765	hvu-r.1 for 123443291	hvu-r.1 for 123399284	hvu-r.1 for 123447816	sbi-r.1 for 8085681	sbi-r.1 for 8074162	sbi-r.1 for 8077550	bdi-r.1 for 100826804	bdi-r.1 for 100825769	bdi-r.1 for 100824282	cre-r.1 for CHLRE_03g177700v5

Ortholog

Ortholog ID: 230

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

NINA

Function^*

protein NLP9

protein NLP4

protein NLP4-like

Plant regulator RWP-RK family protein

protein NODULE INCEPTION 2a

protein NLP7

protein NODULE INCEPTION 1a

protein NLP4

protein NLP8

protein NLP5

protein NLP7

protein NLP9

protein NLP7

protein NLP9

protein NLP5

protein NLP2

protein NLP6

protein NLP2

protein NLP5

protein NLP4-like

protein NLP2

protein NLP4

protein NLP9-like

protein NLP9

protein NLP7-like

protein NLP4

protein NLP9-like

protein NLP2

protein NLP9

protein NLP6-like

protein NLP1-like

protein NLP3-like

protein NLP2-like

uncharacterized LOC100381753

NIN-like protein 1

protein NLP2

protein NLP3

protein NLP1

protein NLP2-like

protein NLP1

protein NLP2

protein NLP1

protein NLP3

protein NLP2

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00710	Carbon fixation by Calvin cycle	3
ppo01200	Carbon metabolism	3
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae00040	Pentose and glucuronate interconversions	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

Expression

Expression pattern

Entrez Gene ID^*

100262961

100253057

100258191

842761

825127

818951

100792100

100797708

100787220

103872852

103866723

103832092

7477839

7469575

25479714

11423270

11421786

107908608

107951378

107931923

106406403

106411272

106440730

102616132

102617751

102611491

101246738

101260397

101261639

102599232

102602337

102598698

107779869

107828483

107790861

9268032

4328230

4350238

100381753

100285205

103646273

123045891

123077913

123105806

123447816

123427118

8085681

8074162

8060198

100825769

100844863

100845720

5728827

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	3	1	3	3	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100262961 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100262961 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**