ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8076465	WD repeat-containing protein 44
sbi-r.1	8073010	2-deoxy-glucose resistant protein 2
sbi-r.1	8082869	WD repeat-containing protein 44
zma-u.5	100281427	uncharacterized LOC100281427
zma-u.5	100275689	uncharacterized LOC100275689
zma-u.5	100501308	WD repeat-containing protein 44
osa-u.5	4336699	uncharacterized LOC4336699
osa-u.5	4337413	uncharacterized LOC4337413
tae-r.2	123046286	uncharacterized WD repeat-containing protein C18H10.05
tae-r.2	123046047	WD repeat-containing protein 44
tae-r.2	123045438	nuclear distribution protein nudF
hvu-r.1	123427482	WD repeat-containing protein 44-like
hvu-r.1	123428340	WD repeat-containing protein 44-like
hvu-r.1	123449932	uncharacterized LOC123449932
bdi-r.1	100842788	uncharacterized LOC100842788
bdi-r.1	100841789	WD repeat-containing protein 44
bdi-r.1	100845914	WD repeat-containing protein 44
ath-u.5	AT2G37670	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G64610	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G48870	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100788374	WD repeat-containing protein 44
gma-u.5	100782200	WD repeat-containing protein 44
gma-u.5	100780979	periodic tryptophan protein 2 homolog
sly-u.5	101260733	uncharacterized WD repeat-containing protein C18H10.05
sly-u.5	101244103	uncharacterized LOC101244103
sly-u.5	101244822	uncharacterized LOC101244822
bra-r.6	103850247	uncharacterized LOC103850247
bra-r.6	103838192	WD repeat-containing protein 44
bra-r.6	103844825	WD repeat-containing protein 44
vvi-u.5	100264190	uncharacterized LOC100264190
vvi-u.5	100241604	WD repeat-containing protein YMR102C
vvi-u.5	100245187	WD repeat-containing protein YMR102C
ppo-u.5	7464287	uncharacterized LOC7464287
ppo-u.5	7475169	uncharacterized LOC7475169
ppo-u.5	7485061	uncharacterized LOC7485061
mtr-u.5	11436750	WD repeat-containing protein 44
mtr-u.5	11435030	2-deoxy-glucose resistant protein 2
mtr-u.5	11408556	uncharacterized LOC11408556
ghi-r.1	107929490	uncharacterized WD repeat-containing protein C18H10.05
ghi-r.1	107924375	WD repeat-containing protein 44
ghi-r.1	107924161	WD repeat-containing protein 44
bna-r.1	125576587	uncharacterized LOC125576587
bna-r.1	111200919	WD repeat-containing protein 44-like
sot-r.1	102583402	WD repeat-containing protein 44
sot-r.1	102585613	U4/U6 small nuclear ribonucleoprotein Prp4
sot-r.1	102593255	WD repeat-containing protein YMR102C
cit-r.1	102612372	uncharacterized LOC102612372
cit-r.1	102614368	uncharacterized LOC102614368
cit-r.1	102618704	WD repeat-containing protein YMR102C-like
nta-r.1	107810992	uncharacterized LOC107810992
nta-r.1	107766553	uncharacterized LOC107766553
nta-r.1	107769711	uncharacterized LOC107769711
cre-r.1	CHLRE_06g276100v5	uncharacterized protein

Top 50 coexpressed genes to 8076465 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8076465 (sbi-r.1 coexpression data)

CoexMap"8076465"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4172 genes)

IEA

Protein

XP_002447325.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_002447325.1)

Subcellular
localization
TargetP

other 8

(predict for XP_002447325.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8076465	sbi-r.1 for 8073010	sbi-r.1 for 8082869	zma-u.5 for 100281427	zma-u.5 for 100275689	zma-u.5 for 100501308	osa-u.5 for 4336699	osa-u.5 for 4337413	tae-r.2 for 123046286	tae-r.2 for 123046047	tae-r.2 for 123045438	hvu-r.1 for 123427482	hvu-r.1 for 123428340	hvu-r.1 for 123449932	bdi-r.1 for 100842788	bdi-r.1 for 100841789	bdi-r.1 for 100845914	ath-u.5 for AT2G37670	ath-u.5 for AT1G64610	ath-u.5 for AT1G48870	gma-u.5 for 100788374	gma-u.5 for 100782200	gma-u.5 for 100780979	sly-u.5 for 101260733	sly-u.5 for 101244103	sly-u.5 for 101244822	bra-r.6 for 103850247	bra-r.6 for 103838192	bra-r.6 for 103844825	vvi-u.5 for 100264190	vvi-u.5 for 100241604	vvi-u.5 for 100245187	ppo-u.5 for 7464287	ppo-u.5 for 7475169	ppo-u.5 for 7485061	mtr-u.5 for 11436750	mtr-u.5 for 11435030	mtr-u.5 for 11408556	ghi-r.1 for 107929490	ghi-r.1 for 107924375	ghi-r.1 for 107924161	bna-r.1 for 125576587	bna-r.1 for 111200919	sot-r.1 for 102583402	sot-r.1 for 102585613	sot-r.1 for 102593255	cit-r.1 for 102612372	cit-r.1 for 102614368	cit-r.1 for 102618704	nta-r.1 for 107810992	nta-r.1 for 107766553	nta-r.1 for 107769711	cre-r.1 for CHLRE_06g276100v5

Ortholog

Ortholog ID: 182

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

2-deoxy-glucose resistant protein 2

WD repeat-containing protein 44

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

uncharacterized LOC4336699

uncharacterized LOC4337413

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC123449932

uncharacterized WD repeat-containing protein sll0163-like

WD repeat-containing protein 44-like

uncharacterized LOC100842788

WD repeat-containing protein 44

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

uncharacterized LOC101256031

uncharacterized LOC101245001

uncharacterized LOC101249662

uncharacterized LOC103850247

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

uncharacterized LOC100249640

uncharacterized LOC7497266

uncharacterized LOC7497506

vegetative incompatibility protein HET-E-1

2-deoxy-glucose resistant protein 2

WD repeat-containing protein 44

uncharacterized WD repeat-containing protein alr3466

WD repeat-containing protein 44

U4/U6 small nuclear ribonucleoprotein Prp4

WD repeat-containing protein 44

uncharacterized LOC102614368

WD repeat-containing protein YMR102C-like

uncharacterized LOC102609724

uncharacterized LOC107766553

WD repeat-containing protein YMR102C

uncharacterized LOC107823380

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00900	Terpenoid backbone biosynthesis	3
zma00620	Pyruvate metabolism	2
zma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	3
osa00566	Sulfoquinovose metabolism	3
osa00564	Glycerophospholipid metabolism	2
osa00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	6
tae04626	Plant-pathogen interaction	6
tae00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	4
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	4
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04016	MAPK signaling pathway - plant	4
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	2
nta00790	Folate biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

8073010

8057600

103641627

103641868

4336699

4337413

123191051

123190040

123127830

123449932

123426697

123399755

100842788

100828955

100825146

842769

831780

820786

100807177

100817209

100801576

101256031

101245001

101249662

103850247

103844882

103865619

100241604

100245187

100249640

7497266

7497506

7467055

11435030

25487371

25502243

107920400

107904514

121215517

106387484

106366726

102583402

102585613

102595963

102614368

102618704

102609724

107766553

107770909

107823380

5721740

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Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	3	3	3	3	3	3	3	3	3	3	3	2	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8076465 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8076465 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**