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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077862   uncharacterized protein At4g14342 
 sbi-r.1   8059073   uncharacterized protein At4g14342 
 zma-u.5   103653311   uncharacterized protein At4g14342 
 zma-u.5   100285762   uncharacterized LOC100285762 
 osa-u.5   4345702   uncharacterized protein At4g14342 
 tae-r.2   123182694   uncharacterized protein At4g14342 
 tae-r.2   123182894   uncharacterized protein At4g14342 
 tae-r.2   123141020   uncharacterized protein At4g14342 
 hvu-r.1   123447752   uncharacterized protein At4g14342 
 hvu-r.1   123448972   uncharacterized protein At4g14342-like 
 bdi-r.1   100841881   uncharacterized protein At4g14342 
 ath-u.5   AT3G23325   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 ath-u.5   AT4G14342   Splicing factor 3B subunit 5/RDS3 complex subunit 10 
 gma-u.5   100817663   uncharacterized protein At4g14342 
 gma-u.5   100305893   uncharacterized protein At4g14342 
 sly-u.5   101247946   uncharacterized protein At4g14342 
 sly-u.5   101244858   uncharacterized protein At4g14342-like 
 bra-r.6   103828752   uncharacterized protein At4g14342 
 bra-r.6   103870650   uncharacterized protein At4g14342 
 ppo-u.5   7467542   uncharacterized protein At4g14342 
 ppo-u.5   7475394   uncharacterized protein At4g14342 
 mtr-u.5   11416194   uncharacterized protein At4g14342 
 mtr-u.5   11407458   uncharacterized protein At4g14342 
 ghi-r.1   107906329   uncharacterized protein At4g14342 
 ghi-r.1   107941154   uncharacterized protein At4g14342 
 bna-r.1   106421401   uncharacterized protein At4g14342 
 bna-r.1   106445744   uncharacterized protein At4g14342 
 bna-r.1   106390762   uncharacterized protein At4g14342-like 
 sot-r.1   102596277   uncharacterized protein At4g14342 
 sot-r.1   102605884   uncharacterized protein At4g14342 
 sot-r.1   102597856   uncharacterized protein At4g14342-like 
 cit-r.1   102626653   uncharacterized protein At4g14342 
 cit-r.1   102616163   hypothetical protein 
 nta-r.1   107769380   uncharacterized protein At4g14342 
 nta-r.1   107817263   uncharacterized protein At4g14342 
 cre-r.1   CHLRE_14g627900v5   uncharacterized protein 

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Top 50 coexpressed genes to 8077862 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077862 (sbi-r.1 coexpression data)

CoexMap"8077862"


sbiLOC8077862 | Entrez gene ID : 8077862    
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 2 2 1 3 2 1 2 2 2 2 2 2 2 3 3 2 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (25 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (39 genes)  IEA  
GO MF
Protein XP_002445576.1 [sequence] [blastp]
XP_021320999.1 [sequence] [blastp]
XP_021321000.1 [sequence] [blastp]
XP_021321001.1 [sequence] [blastp]
XP_021321002.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 3,  cyto 2,  nucl_plas 2,  extr 1,  pero 1  (predict for XP_002445576.1)
nucl 3,  mito 3,  cyto 2,  nucl_plas 2,  extr 1,  pero 1  (predict for XP_021320999.1)
nucl 3,  mito 3,  cyto 2,  nucl_plas 2,  extr 1,  pero 1  (predict for XP_021321000.1)
nucl 3,  mito 3,  cyto 2,  nucl_plas 2,  extr 1,  pero 1  (predict for XP_021321001.1)
nucl 3,  mito 3,  cyto 2,  nucl_plas 2,  extr 1,  pero 1  (predict for XP_021321002.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002445576.1)
other 7  (predict for XP_021320999.1)
other 7  (predict for XP_021321000.1)
other 7  (predict for XP_021321001.1)
other 7  (predict for XP_021321002.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077862
sbi-r.1
for
8059073
zma-u.5
for
103653311
zma-u.5
for
100285762
osa-u.5
for
4345702
tae-r.2
for
123182694
tae-r.2
for
123182894
tae-r.2
for
123141020
hvu-r.1
for
123447752
hvu-r.1
for
123448972
bdi-r.1
for
100841881
ath-u.5
for
AT3G23325
ath-u.5
for
AT4G14342
gma-u.5
for
100817663
gma-u.5
for
100305893
sly-u.5
for
101247946
sly-u.5
for
101244858
bra-r.6
for
103828752
bra-r.6
for
103870650
ppo-u.5
for
7467542
ppo-u.5
for
7475394
mtr-u.5
for
11416194
mtr-u.5
for
11407458
ghi-r.1
for
107906329
ghi-r.1
for
107941154
bna-r.1
for
106421401
bna-r.1
for
106445744
bna-r.1
for
106390762
sot-r.1
for
102596277
sot-r.1
for
102605884
sot-r.1
for
102597856
cit-r.1
for
102626653
cit-r.1
for
102616163
nta-r.1
for
107769380
nta-r.1
for
107817263
cre-r.1
for
CHLRE_14g627900v5


Ortholog ID: 4559
Species sbi sbi zma zma osa tae tae tae hvu hvu bdi ath ath gma gma sly sly bra bra ppo ppo mtr mtr ghi ghi bna bna bna sot sot sot cit cit nta nta cre
Symbol LOC8077862 LOC8059073 LOC103653311 LOC100285762 LOC4345702 LOC123182694 LOC123182894 LOC123143496 LOC123447752 LOC123448972 LOC100841881 AT3G23325 AT4G14342 LOC100817663 LOC100305893 LOC101247946 LOC101244858 LOC103828752 LOC103870650 LOC7467542 LOC7475394 LOC11416194 LOC11407458 LOC107906329 LOC107941154 LOC106421401 LOC106445744 LOC106357890 LOC102596277 LOC102605884 LOC102597856 LOC102626653 LOC102616163 LOC107769380 LOC107817263 CHLRE_14g627900v5
Function* uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized LOC100285762 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 Splicing factor 3B subunit 5/RDS3 complex subunit 10 Splicing factor 3B subunit 5/RDS3 complex subunit 10 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein At4g14342-like uncharacterized protein At4g14342 hypothetical protein uncharacterized protein At4g14342 uncharacterized protein At4g14342 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 3
zma00513 Various types of N-glycan biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03040 Spliceosome 4
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu04148 Efferocytosis 2
hvu03050 Proteasome 2
hvu00020 Citrate cycle (TCA cycle) 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03040 Spliceosome 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04120 Ubiquitin mediated proteolysis 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03010 Ribosome 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00190 Oxidative phosphorylation 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo04075 Plant hormone signal transduction 3
ppo03040 Spliceosome 2
ppo03020 RNA polymerase 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 6
mtr00190 Oxidative phosphorylation 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 10
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03060 Protein export 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 3
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03040 Spliceosome 5
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03010 Ribosome 5
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03050 Proteasome 4
nta03018 RNA degradation 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre03040 Spliceosome 2
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8077862 8059073 103653311 100285762 4345702 123182694 123182894 123143496 123447752 123448972 100841881 821913 827077 100817663 100305893 101247946 101244858 103828752 103870650 7467542 7475394 11416194 11407458 107906329 107941154 106421401 106445744 106357890 102596277 102605884 102597856 102626653 102616163 107769380 107817263 5718277
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