ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8081754	uncharacterized LOC8081754
zma-u.5	103647752	Cotton fiber expressed protein 1
zma-u.5	100284699	uncharacterized LOC100284699
osa-u.5	4343609	translation initiation factor IF-2
tae-r.2	123041124	uncharacterized LOC123041124
tae-r.2	123052406	uncharacterized LOC123052406
tae-r.2	123185126	uncharacterized LOC123185126
hvu-r.1	123425689	uncharacterized LOC123425689
bdi-r.1	100839277	uncharacterized LOC100839277
ath-u.5	AT5G54300	cotton fiber-like protein (DUF761)
ath-u.5	AT1G61260	cotton fiber (DUF761)
gma-u.5	100818795	uncharacterized LOC100818795
gma-u.5	100794998	uncharacterized LOC100794998
gma-u.5	100802926	uncharacterized LOC100802926
sly-u.5	101263673	uncharacterized LOC101263673
sly-u.5	101243730	uncharacterized LOC101243730
bra-r.6	103830530	uncharacterized LOC103830530
bra-r.6	103838450	uncharacterized LOC103838450
bra-r.6	103844888	uncharacterized LOC103844888
vvi-u.5	100267532	uncharacterized LOC100267532
vvi-u.5	100244739	uncharacterized LOC100244739
ppo-u.5	7460856	uncharacterized LOC7460856
ppo-u.5	18095649	uncharacterized LOC18095649
ppo-u.5	7485586	uncharacterized LOC7485586
mtr-u.5	11434841	uncharacterized LOC11434841
mtr-u.5	11416475	uncharacterized LOC11416475
ghi-r.1	121213801	translation initiation factor IF-2
ghi-r.1	107942076	uncharacterized LOC107942076
ghi-r.1	107913997	uncharacterized LOC107913997
bna-r.1	125579147	uncharacterized LOC125579147
bna-r.1	106437540	uncharacterized LOC106437540
bna-r.1	106437214	uncharacterized LOC106437214
sot-r.1	102580825	uncharacterized LOC102580825
sot-r.1	102585998	uncharacterized LOC102585998
sot-r.1	102589989	uncharacterized LOC102589989
cit-r.1	102624543	hypothetical protein
cit-r.1	102627872	uncharacterized LOC102627872
nta-r.1	107831048	uncharacterized LOC107831048
nta-r.1	107794235	uncharacterized LOC107794235

Top 50 coexpressed genes to 8081754 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8081754 (sbi-r.1 coexpression data)

CoexMap"8081754"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002463025.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, extr 1, mito 1, plas 1, E.R. 1, pero 1, E.R._plas 1, mito_plas 1

(predict for XP_002463025.2)

Subcellular
localization
TargetP

chlo 7, mito 4

(predict for XP_002463025.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8081754	zma-u.5 for 103647752	zma-u.5 for 100284699	osa-u.5 for 4343609	tae-r.2 for 123041124	tae-r.2 for 123052406	tae-r.2 for 123185126	hvu-r.1 for 123425689	bdi-r.1 for 100839277	ath-u.5 for AT5G54300	ath-u.5 for AT1G61260	gma-u.5 for 100818795	gma-u.5 for 100794998	gma-u.5 for 100802926	sly-u.5 for 101263673	sly-u.5 for 101243730	bra-r.6 for 103830530	bra-r.6 for 103838450	bra-r.6 for 103844888	vvi-u.5 for 100267532	vvi-u.5 for 100244739	ppo-u.5 for 7460856	ppo-u.5 for 18095649	ppo-u.5 for 7485586	mtr-u.5 for 11434841	mtr-u.5 for 11416475	ghi-r.1 for 121213801	ghi-r.1 for 107942076	ghi-r.1 for 107913997	bna-r.1 for 125579147	bna-r.1 for 106437540	bna-r.1 for 106437214	sot-r.1 for 102580825	sot-r.1 for 102585998	sot-r.1 for 102589989	cit-r.1 for 102624543	cit-r.1 for 102627872	nta-r.1 for 107831048	nta-r.1 for 107794235

Ortholog

Ortholog ID: 2853

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8081754

Cotton fiber expressed protein 1

uncharacterized LOC100284699

translation initiation factor IF-2

uncharacterized LOC123041124

uncharacterized LOC123052406

uncharacterized LOC123185126

uncharacterized LOC123425689

uncharacterized LOC100839277

cotton fiber-like protein (DUF761)

cotton fiber (DUF761)

uncharacterized LOC100818795

uncharacterized LOC100794998

uncharacterized LOC100802926

uncharacterized LOC101263673

uncharacterized LOC101243730

uncharacterized LOC103830530

uncharacterized LOC103844888

uncharacterized LOC103857045

uncharacterized LOC100267532

uncharacterized LOC100244739

uncharacterized LOC7460856

uncharacterized LOC18095649

uncharacterized LOC7485586

uncharacterized LOC11434841

uncharacterized LOC11416475

translation initiation factor IF-2

uncharacterized LOC107913997

uncharacterized LOC107925301

uncharacterized LOC106437191

uncharacterized BNAC01G29360D

uncharacterized LOC106421532

uncharacterized LOC102580825

uncharacterized LOC102585998

uncharacterized LOC102589989

hypothetical protein

uncharacterized LOC102627872

uncharacterized LOC107831048

uncharacterized LOC107803683

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3
sbi00402	Benzoxazinoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4
zma03008	Ribosome biogenesis in eukaryotes	3
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bra00350	Tyrosine metabolism	3
bra00360	Phenylalanine metabolism	3
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00052	Galactose metabolism	5
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	5
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

8081754

103647752

100284699

4343609

123041124

123052406

123185126

123425689

100839277

835518

842420

100818795

100794998

100802926

101263673

101243730

103830530

103844888

103857045

100267532

100244739

7460856

18095649

7485586

11434841

11416475

121213801

107913997

107925301

106437191

106357839

106421532

102580825

102585998

102589989

102624543

102627872

107831048

107803683

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	2	3	2	3	2	3	2	3	3	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8081754 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8081754 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**