ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100802926	uncharacterized LOC100802926
gma-r.7	100802926	uncharacterized LOC100802926
gma-u.5	100818795	uncharacterized LOC100818795
gma-u.5	100794998	uncharacterized LOC100794998
mtr-u.5	11416475	uncharacterized LOC11416475
mtr-u.5	11434841	uncharacterized LOC11434841
ppo-u.5	18095649	uncharacterized LOC18095649
ppo-u.5	7485586	uncharacterized LOC7485586
ppo-u.5	7460856	uncharacterized LOC7460856
ath-u.5	AT5G54300	cotton fiber-like protein (DUF761)
ath-u.5	AT1G61260	cotton fiber (DUF761)
bra-r.6	103830530	uncharacterized LOC103830530
bra-r.6	103838450	uncharacterized LOC103838450
bra-r.6	103844888	uncharacterized LOC103844888
vvi-u.5	100244739	uncharacterized LOC100244739
vvi-u.5	100267532	uncharacterized LOC100267532
ghi-r.1	107913997	uncharacterized LOC107913997
ghi-r.1	107917726	uncharacterized LOC107917726
ghi-r.1	107925301	uncharacterized LOC107925301
bna-r.1	106437214	uncharacterized LOC106437214
bna-r.1	106437540	uncharacterized LOC106437540
bna-r.1	125579147	uncharacterized LOC125579147
cit-r.1	102624543	hypothetical protein
cit-r.1	102627872	uncharacterized LOC102627872
sly-u.5	101263673	uncharacterized LOC101263673
sly-u.5	101243730	uncharacterized LOC101243730
sot-r.1	102580825	uncharacterized LOC102580825
sot-r.1	102585998	uncharacterized LOC102585998
sot-r.1	102589989	uncharacterized LOC102589989
nta-r.1	107803683	uncharacterized LOC107803683
nta-r.1	107794235	uncharacterized LOC107794235
osa-u.5	4343609	translation initiation factor IF-2
zma-u.5	103647752	Cotton fiber expressed protein 1
zma-u.5	100284699	uncharacterized LOC100284699
tae-r.2	123041124	uncharacterized LOC123041124
tae-r.2	123052406	uncharacterized LOC123052406
tae-r.2	123185126	uncharacterized LOC123185126
hvu-r.1	123425689	uncharacterized LOC123425689
sbi-r.1	8081754	uncharacterized LOC8081754
bdi-r.1	100839277	uncharacterized LOC100839277

Top 50 coexpressed genes to 100802926 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100802926 (gma-u.5 coexpression data)

CoexMap"100802926"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003539584.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, vacu 2, chlo 1, E.R. 1

(predict for XP_003539584.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003539584.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100802926	gma-r.7 for 100802926	gma-u.5 for 100818795	gma-u.5 for 100794998	mtr-u.5 for 11416475	mtr-u.5 for 11434841	ppo-u.5 for 18095649	ppo-u.5 for 7485586	ppo-u.5 for 7460856	ath-u.5 for AT5G54300	ath-u.5 for AT1G61260	bra-r.6 for 103830530	bra-r.6 for 103838450	bra-r.6 for 103844888	vvi-u.5 for 100244739	vvi-u.5 for 100267532	ghi-r.1 for 107913997	ghi-r.1 for 107917726	ghi-r.1 for 107925301	bna-r.1 for 106437214	bna-r.1 for 106437540	bna-r.1 for 125579147	cit-r.1 for 102624543	cit-r.1 for 102627872	sly-u.5 for 101263673	sly-u.5 for 101243730	sot-r.1 for 102580825	sot-r.1 for 102585998	sot-r.1 for 102589989	nta-r.1 for 107803683	nta-r.1 for 107794235	osa-u.5 for 4343609	zma-u.5 for 103647752	zma-u.5 for 100284699	tae-r.2 for 123041124	tae-r.2 for 123052406	tae-r.2 for 123185126	hvu-r.1 for 123425689	sbi-r.1 for 8081754	bdi-r.1 for 100839277

Ortholog

Ortholog ID: 2853

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100802926

uncharacterized LOC100818795

uncharacterized LOC100794998

uncharacterized LOC11416475

uncharacterized LOC11434841

uncharacterized LOC18095649

uncharacterized LOC7485586

uncharacterized LOC7460856

cotton fiber-like protein (DUF761)

cotton fiber (DUF761)

uncharacterized LOC103830530

uncharacterized LOC103844888

uncharacterized LOC103857045

uncharacterized LOC100244739

uncharacterized LOC100267532

uncharacterized LOC107913997

uncharacterized LOC107925301

translation initiation factor IF-2

uncharacterized LOC106437191

uncharacterized BNAC01G29360D

uncharacterized LOC106421532

hypothetical protein

uncharacterized LOC102627872

uncharacterized LOC101263673

uncharacterized LOC101243730

uncharacterized LOC102580825

uncharacterized LOC102585998

uncharacterized LOC102589989

uncharacterized LOC107803683

uncharacterized LOC107831048

translation initiation factor IF-2

Cotton fiber expressed protein 1

uncharacterized LOC100284699

uncharacterized LOC123041124

uncharacterized LOC123052406

uncharacterized LOC123185126

uncharacterized LOC123425689

uncharacterized LOC8081754

uncharacterized LOC100839277

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bra00350	Tyrosine metabolism	3
bra00360	Phenylalanine metabolism	3
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00052	Galactose metabolism	5
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	5
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4
zma03008	Ribosome biogenesis in eukaryotes	3
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3
sbi00402	Benzoxazinoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

100802926

100818795

100794998

11416475

11434841

18095649

7485586

7460856

835518

842420

103830530

103844888

103857045

100244739

100267532

107913997

107925301

121213801

106437191

106357839

106421532

102624543

102627872

101263673

101243730

102580825

102585998

102589989

107803683

107831048

4343609

103647752

100284699

123041124

123052406

123185126

123425689

8081754

100839277

The preparation time of this page was 0.4 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	3	2	3	3	2	2	3	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100802926 (gma-u.5 coexpression data)

Top 50 enrichment test to 100802926 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**