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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082310   peter Pan-like protein 
 zma-u.5   100274446   Suppressor of SWI4 1 
 osa-u.5   4332803   peter Pan-like protein 
 tae-r.2   123099198   peter Pan-like protein 
 tae-r.2   123097511   peter Pan-like protein 
 tae-r.2   123092014   peter Pan-like protein 
 hvu-r.1   123448630   peter Pan-like protein 
 bdi-r.1   100844203   peter Pan-like protein 
 ath-u.5   PPAN   PETER PAN-like protein 
 gma-u.5   100800809   peter Pan-like protein 
 gma-u.5   100785073   ribosome biogenesis protein SNAIL1-like 
 sly-u.5   101249211   peter Pan-like protein 
 bra-r.6   103873471   peter Pan-like protein 
 bra-r.6   103837394   peter Pan-like protein 
 vvi-u.5   100252111   peter Pan-like protein 
 ppo-u.5   7491303   peter Pan-like protein 
 ppo-u.5   7478840   peter Pan-like protein 
 mtr-u.5   11439201   peter Pan-like protein 
 ghi-r.1   107910134   peter Pan-like protein 
 ghi-r.1   107926890   peter Pan-like protein 
 bna-r.1   106347771   peter Pan-like protein 
 bna-r.1   106451920   peter Pan-like protein 
 bna-r.1   106366084   peter Pan-like protein 
 sot-r.1   102594773   peter Pan-like protein 
 sot-r.1   102589872   peter Pan-like protein 
 cit-r.1   102628542   peter Pan-like protein 
 nta-r.1   107798784   peter Pan-like protein 
 nta-r.1   107826761   peter Pan-like protein 
 cre-r.1   CHLRE_10g450879v5   uncharacterized protein 

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Top 50 coexpressed genes to 8082310 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082310 (sbi-r.1 coexpression data)

CoexMap"8082310"


sbiLOC8082310 | Entrez gene ID : 8082310      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 2 1 2 1 2 3 2 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (25 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (205 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (25 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (67 genes)  IEA  
Protein XP_002467878.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1  (predict for XP_002467878.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_002467878.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082310
zma-u.5
for
100274446
osa-u.5
for
4332803
tae-r.2
for
123099198
tae-r.2
for
123097511
tae-r.2
for
123092014
hvu-r.1
for
123448630
bdi-r.1
for
100844203
ath-u.5
for
PPAN
gma-u.5
for
100800809
gma-u.5
for
100785073
sly-u.5
for
101249211
bra-r.6
for
103873471
bra-r.6
for
103837394
vvi-u.5
for
100252111
ppo-u.5
for
7491303
ppo-u.5
for
7478840
mtr-u.5
for
11439201
ghi-r.1
for
107910134
ghi-r.1
for
107926890
bna-r.1
for
106347771
bna-r.1
for
106451920
bna-r.1
for
106366084
sot-r.1
for
102594773
sot-r.1
for
102589872
cit-r.1
for
102628542
nta-r.1
for
107798784
nta-r.1
for
107826761
cre-r.1
for
CHLRE_10g450879v5


Ortholog ID: 7392
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot sot cit nta nta cre
Symbol LOC8082310 LOC100274446 LOC4332803 LOC123099198 LOC123092014 LOC123085977 LOC123448630 LOC100844203 PPAN LOC100800809 LOC100785073 LOC101249211 LOC103873471 LOC103837394 LOC100252111 LOC7491303 LOC7478840 LOC11439201 LOC107910134 LOC107926890 LOC106451920 LOC106366084 LOC106421827 LOC102594773 LOC102589872 LOC102628542 LOC107798784 LOC107826761 CHLRE_10g450879v5
Function* peter Pan-like protein Suppressor of SWI4 1 peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein PETER PAN-like protein peter Pan-like protein ribosome biogenesis protein SNAIL1-like peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8082310 100274446 4332803 123099198 123092014 123085977 123448630 100844203 836299 100800809 100785073 101249211 103873471 103837394 100252111 7491303 7478840 11439201 107910134 107926890 106451920 106366084 106421827 102594773 102589872 102628542 107798784 107826761 66055079
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