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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g450879v5   uncharacterized protein 
 ath-u.5   PPAN   PETER PAN-like protein 
 gma-u.5   100800809   peter Pan-like protein 
 gma-u.5   100785073   ribosome biogenesis protein SNAIL1-like 
 sly-u.5   101249211   peter Pan-like protein 
 osa-u.5   4332803   peter Pan-like protein 
 zma-u.5   100274446   Suppressor of SWI4 1 
 vvi-u.5   100252111   peter Pan-like protein 
 ppo-u.5   7491303   peter Pan-like protein 
 ppo-u.5   7478840   peter Pan-like protein 
 mtr-u.5   11439201   peter Pan-like protein 

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Top 50 coexpressed genes to CHLRE_10g450879v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g450879v5 (cre-r.1 coexpression data)

CoexMap"66055079"


creCHLRE_10g450879v5 | Entrez gene ID : 66055079    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (20 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (23 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (36 genes)  IEA  
Protein XP_042920361.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cyto_nucl 3  (predict for XP_042920361.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_042920361.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g450879v5

.
ath-u.5
for
PPAN

.
gma-u.5
for
100800809

.
gma-u.5
for
100785073

.
sly-u.5
for
101249211

.
osa-u.5
for
4332803

.
zma-u.5
for
100274446

.
vvi-u.5
for
100252111

.
ppo-u.5
for
7491303

.
ppo-u.5
for
7478840

.
mtr-u.5
for
11439201

.


Ortholog ID: 7392
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PPAN LOC100800809 LOC100785073 LOC101249211 LOC4332803 LOC100274446 LOC103873471 LOC103837394 LOC100252111 LOC7478840 LOC7491303 LOC11439201 LOC123092014 LOC123099198 LOC123448630 LOC107926890 LOC107910134 LOC106421827 LOC106366084 CHLRE_10g450879v5 LOC8082310 LOC102589872 LOC102594773 LOC102628542 LOC100844203 LOC107798784 LOC107826761
Function* PETER PAN-like protein peter Pan-like protein ribosome biogenesis protein SNAIL1-like peter Pan-like protein peter Pan-like protein Suppressor of SWI4 1 peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein uncharacterized protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein peter Pan-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836299 100800809 100785073 101249211 4332803 100274446 103873471 103837394 100252111 7478840 7491303 11439201 123092014 123099198 123448630 107926890 107910134 106421827 106366084 66055079 8082310 102589872 102594773 102628542 100844203 107798784 107826761
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