ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8084140	trafficking protein particle complex subunit 8
zma-u.5	103644142	trafficking protein particle complex subunit 8
osa-u.5	4334355	uncharacterized LOC4334355
tae-r.2	123105327	trafficking protein particle complex subunit 8
tae-r.2	123123114	trafficking protein particle complex subunit 8
tae-r.2	123113587	trafficking protein particle complex subunit 8
hvu-r.1	123452594	trafficking protein particle complex subunit 8
bdi-r.1	100826281	trafficking protein particle complex subunit 8
ath-u.5	AT5G16280	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100809666	trafficking protein particle complex subunit 8
gma-u.5	100813062	trafficking protein particle complex subunit 8
sly-u.5	101264146	uncharacterized LOC101264146
bra-r.6	103847894	trafficking protein particle complex subunit 8-like
bra-r.6	103846338	trafficking protein particle complex subunit 8
bra-r.6	103856190	trafficking protein particle complex subunit 8
vvi-u.5	100248747	uncharacterized LOC100248747
ppo-u.5	7469943	uncharacterized LOC7469943
mtr-u.5	25499493	trafficking protein particle complex subunit 8
ghi-r.1	107934599	trafficking protein particle complex subunit 8
ghi-r.1	107948285	trafficking protein particle complex subunit 8
ghi-r.1	107942787	trafficking protein particle complex subunit 8
bna-r.1	111213485	trafficking protein particle complex subunit 8
bna-r.1	111210999	trafficking protein particle complex subunit 8-like
bna-r.1	106369910	trafficking protein particle complex subunit 8-like
sot-r.1	102600916	trafficking protein particle complex subunit 8
cit-r.1	102628846	uncharacterized LOC102628846
nta-r.1	107781699	uncharacterized LOC107781699
nta-r.1	107825691	uncharacterized LOC107825691
cre-r.1	CHLRE_01g024400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0034497 [list] [network] protein localization to phagophore assembly site	(12 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(89 genes)	IEA

GO CC

GO:1990072 [list] [network] TRAPPIII protein complex	(4 genes)	IEA
GO:0000407 [list] [network] phagophore assembly site	(21 genes)	IEA
GO:0031410 [list] [network] cytoplasmic vesicle	(284 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(4172 genes)

IEA

Protein

XP_021319190.1 [sequence] [blastp]
XP_021319193.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 1, chlo 1, mito 1, plas 1, cysk 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1	(predict for XP_021319190.1)
nucl 4, cyto 4, cysk 1	(predict for XP_021319193.1)

Subcellular
localization
TargetP

other 4	(predict for XP_021319190.1)
other 7	(predict for XP_021319193.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8084140	zma-u.5 for 103644142	osa-u.5 for 4334355	tae-r.2 for 123105327	tae-r.2 for 123123114	tae-r.2 for 123113587	hvu-r.1 for 123452594	bdi-r.1 for 100826281	ath-u.5 for AT5G16280	gma-u.5 for 100809666	gma-u.5 for 100813062	sly-u.5 for 101264146	bra-r.6 for 103847894	bra-r.6 for 103846338	bra-r.6 for 103856190	vvi-u.5 for 100248747	ppo-u.5 for 7469943	mtr-u.5 for 25499493	ghi-r.1 for 107934599	ghi-r.1 for 107948285	ghi-r.1 for 107942787	bna-r.1 for 111213485	bna-r.1 for 111210999	bna-r.1 for 106369910	sot-r.1 for 102600916	cit-r.1 for 102628846	nta-r.1 for 107781699	nta-r.1 for 107825691	cre-r.1 for CHLRE_01g024400v5

Ortholog

Ortholog ID: 5833

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*