ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103856190	trafficking protein particle complex subunit 8
bra-r.6	103847894	trafficking protein particle complex subunit 8-like
bra-r.6	103846338	trafficking protein particle complex subunit 8
bna-r.1	111213485	trafficking protein particle complex subunit 8
bna-r.1	111210999	trafficking protein particle complex subunit 8-like
bna-r.1	106369910	trafficking protein particle complex subunit 8-like
ath-u.5	AT5G16280	Tetratricopeptide repeat (TPR)-like superfamily protein
ghi-r.1	107899407	trafficking protein particle complex subunit 8
ghi-r.1	107948285	trafficking protein particle complex subunit 8
ghi-r.1	107942787	trafficking protein particle complex subunit 8
cit-r.1	102628846	uncharacterized LOC102628846
gma-u.5	100813062	trafficking protein particle complex subunit 8
gma-u.5	100809666	trafficking protein particle complex subunit 8
vvi-u.5	100248747	uncharacterized LOC100248747
ppo-u.5	7469943	uncharacterized LOC7469943
mtr-u.5	25499493	trafficking protein particle complex subunit 8
sly-u.5	101264146	uncharacterized LOC101264146
sot-r.1	102600916	trafficking protein particle complex subunit 8
nta-r.1	107825691	uncharacterized LOC107825691
nta-r.1	107781699	uncharacterized LOC107781699
osa-u.5	4334355	uncharacterized LOC4334355
zma-u.5	103644142	trafficking protein particle complex subunit 8
tae-r.2	123105327	trafficking protein particle complex subunit 8
tae-r.2	123123114	trafficking protein particle complex subunit 8
tae-r.2	123113587	trafficking protein particle complex subunit 8
hvu-r.1	123452594	trafficking protein particle complex subunit 8
sbi-r.1	8084140	trafficking protein particle complex subunit 8
bdi-r.1	100826281	trafficking protein particle complex subunit 8
cre-r.1	CHLRE_01g024400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0034497 [list] [network] protein localization to phagophore assembly site	(14 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(152 genes)	IEA

GO CC

GO:1990072 [list] [network] TRAPPIII protein complex	(6 genes)	IEA
GO:0000407 [list] [network] phagophore assembly site	(28 genes)	IEA
GO:0031410 [list] [network] cytoplasmic vesicle	(500 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(6277 genes)

IEA

Protein

XP_033143156.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1

(predict for XP_033143156.1)

Subcellular
localization
TargetP

scret 6, other 5

(predict for XP_033143156.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103856190	bra-r.6 for 103847894	bra-r.6 for 103846338	bna-r.1 for 111213485	bna-r.1 for 111210999	bna-r.1 for 106369910	ath-u.5 for AT5G16280	ghi-r.1 for 107899407	ghi-r.1 for 107948285	ghi-r.1 for 107942787	cit-r.1 for 102628846	gma-u.5 for 100813062	gma-u.5 for 100809666	vvi-u.5 for 100248747	ppo-u.5 for 7469943	mtr-u.5 for 25499493	sly-u.5 for 101264146	sot-r.1 for 102600916	nta-r.1 for 107825691	nta-r.1 for 107781699	osa-u.5 for 4334355	zma-u.5 for 103644142	tae-r.2 for 123105327	tae-r.2 for 123123114	tae-r.2 for 123113587	hvu-r.1 for 123452594	sbi-r.1 for 8084140	bdi-r.1 for 100826281	cre-r.1 for CHLRE_01g024400v5

Ortholog

Ortholog ID: 5833

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*