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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084654   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 zma-u.5   100285845   23S RNA methyltransferase 1 
 osa-u.5   4342000   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 tae-r.2   123167862   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 tae-r.2   123159603   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 tae-r.2   123148587   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 hvu-r.1   123410232   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 bdi-r.1   100824779   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 ath-u.5   AT5G01230   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   100809923   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 sly-u.5   101251806   tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 bra-r.6   103871000   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 bra-r.6   103847498   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 vvi-u.5   100252784   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 ppo-u.5   7455223   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 mtr-u.5   11424755   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 ghi-r.1   107889762   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 ghi-r.1   107890976   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 bna-r.1   106435879   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 bna-r.1   106447854   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 sot-r.1   102604025   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 cit-r.1   102615820   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 nta-r.1   107784458   tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 nta-r.1   107793123   uncharacterized LOC107793123 
 nta-r.1   107774567   tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 cre-r.1   CHLRE_03g145907v5   uncharacterized protein 

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Top 50 coexpressed genes to 8084654 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084654 (sbi-r.1 coexpression data)

CoexMap"8084654"


sbiLOC8084654 | Entrez gene ID : 8084654      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 1 1 2 1 1 1 2 2 1 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (24 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (67 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0008175 [list] [network] tRNA methyltransferase activity  (12 genes)  IEA  
Protein XP_002454722.1 [sequence] [blastp]
XP_021314986.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  chlo 1,  cyto 1,  mito 1,  plas 1,  chlo_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_002454722.1)
E.R. 3,  cyto 2,  E.R._vacu 2,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_021314986.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002454722.1)
other 9  (predict for XP_021314986.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084654
zma-u.5
for
100285845
osa-u.5
for
4342000
tae-r.2
for
123167862
tae-r.2
for
123159603
tae-r.2
for
123148587
hvu-r.1
for
123410232
bdi-r.1
for
100824779
ath-u.5
for
AT5G01230
gma-u.5
for
100809923
sly-u.5
for
101251806
bra-r.6
for
103871000
bra-r.6
for
103847498
vvi-u.5
for
100252784
ppo-u.5
for
7455223
mtr-u.5
for
11424755
ghi-r.1
for
107889762
ghi-r.1
for
107890976
bna-r.1
for
106435879
bna-r.1
for
106447854
sot-r.1
for
102604025
cit-r.1
for
102615820
nta-r.1
for
107784458
nta-r.1
for
107793123
nta-r.1
for
107774567
cre-r.1
for
CHLRE_03g145907v5


Ortholog ID: 9635
Species sbi zma osa tae tae tae hvu bdi ath gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta nta cre
Symbol LOC8084654 LOC100285845 LOC4342000 LOC123167862 LOC123159603 LOC123148587 LOC123410232 LOC100824779 AT5G01230 LOC100809923 LOC101251806 LOC103871000 LOC103847498 LOC100252784 LOC7455223 LOC11424755 LOC107889762 LOC107890976 LOC106435879 LOC106447854 LOC102604025 LOC102615820 LOC107784458 LOC107793123 LOC107774567 CHLRE_03g145907v5
Function* putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 23S RNA methyltransferase 1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase S-adenosyl-L-methionine-dependent methyltransferases superfamily protein putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase uncharacterized LOC107793123 tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03040 Spliceosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae00450 Selenocompound metabolism 6
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00450 Selenocompound metabolism 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04144 Endocytosis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna00240 Pyrimidine metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna03018 RNA degradation 2
bna03040 Spliceosome 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8084654 100285845 4342000 123167862 123159603 123148587 123410232 100824779 830268 100809923 101251806 103871000 103847498 100252784 7455223 11424755 107889762 107890976 106435879 106447854 102604025 102615820 107784458 107793123 107774567 5721239
The preparation time of this page was 3.5 [sec].