ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8084664	uncharacterized LOC8084664
zma-u.5	100275260	uncharacterized LOC100275260
osa-u.5	4331057	uncharacterized LOC4331057
tae-r.2	123146010	uncharacterized LOC123146010
tae-r.2	123128867	uncharacterized LOC123128867
hvu-r.1	123402250	uncharacterized LOC123402250
bdi-r.1	100832056	uncharacterized LOC100832056
ath-u.5	AT3G15900	homoserine O-acetyltransferase
gma-u.5	100527049	uncharacterized LOC100527049
sly-u.5	101248862	uncharacterized LOC101248862
vvi-u.5	100245821	uncharacterized LOC100245821
ppo-u.5	18094869	uncharacterized LOC18094869
mtr-u.5	11432530	uncharacterized LOC11432530
ghi-r.1	107889143	uncharacterized LOC107889143
ghi-r.1	107891674	uncharacterized LOC107891674
bna-r.1	111197894	uncharacterized LOC111197894
bna-r.1	BNAC01G35640D	uncharacterized BNAC01G35640D
sot-r.1	102604155	uncharacterized LOC102604155
cit-r.1	102617226	uncharacterized LOC102617226
cre-r.1	CHLRE_12g547500v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(560 genes)

IEA

GO MF

Protein

XP_002452999.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, vacu 1

(predict for XP_002452999.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_002452999.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8084664	zma-u.5 for 100275260	osa-u.5 for 4331057	tae-r.2 for 123146010	tae-r.2 for 123128867	hvu-r.1 for 123402250	bdi-r.1 for 100832056	ath-u.5 for AT3G15900	gma-u.5 for 100527049	sly-u.5 for 101248862	vvi-u.5 for 100245821	ppo-u.5 for 18094869	mtr-u.5 for 11432530	ghi-r.1 for 107889143	ghi-r.1 for 107891674	bna-r.1 for 111197894	bna-r.1 for BNAC01G35640D	sot-r.1 for 102604155	cit-r.1 for 102617226	cre-r.1 for CHLRE_12g547500v5

Ortholog

Ortholog ID: 10770

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

cit

cre

Symbol

Function^*

uncharacterized LOC8084664

uncharacterized LOC100275260

uncharacterized LOC4331057

uncharacterized LOC123146010

uncharacterized LOC123128867

uncharacterized LOC123402250

uncharacterized LOC100832056

homoserine O-acetyltransferase

uncharacterized LOC100527049

uncharacterized LOC101248862

uncharacterized LOC100245821

uncharacterized LOC18094869

uncharacterized LOC11432530

uncharacterized LOC107889143

uncharacterized LOC107891674

uncharacterized LOC111197894

uncharacterized BNAC01G35640D

uncharacterized LOC102604155

uncharacterized LOC102617226

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	12
sbi00860	Porphyrin metabolism	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00630	Glyoxylate and dicarboxylate metabolism	5
ath01200	Carbon metabolism	5
ath00785	Lipoic acid metabolism	3
ath00260	Glycine, serine and threonine metabolism	3
ath00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2
ppo00270	Cysteine and methionine metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	4
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	9
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00195	Photosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

8084664

100275260

4331057

123146010

123128867

123402250

100832056

820833

100527049

101248862

100245821

18094869

11432530

107889143

107891674

111197894

106377395

102604155

102617226

5719608

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8084664 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8084664 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	cit	cre	bra	nta
Paralog	1	1	1	2	1	1	1	1	1	1	1	1	2	2	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8084664 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8084664 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**