ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101248862	uncharacterized LOC101248862
sly-r.6	101248862	uncharacterized LOC101248862
sot-r.1	102604155	uncharacterized LOC102604155
ath-u.5	AT3G15900	homoserine O-acetyltransferase
gma-u.5	100527049	uncharacterized LOC100527049
vvi-u.5	100245821	uncharacterized LOC100245821
ppo-u.5	18094869	uncharacterized LOC18094869
mtr-u.5	11432530	uncharacterized LOC11432530
ghi-r.1	107889143	uncharacterized LOC107889143
ghi-r.1	107891674	uncharacterized LOC107891674
bna-r.1	BNAC01G35640D	uncharacterized BNAC01G35640D
bna-r.1	111197894	uncharacterized LOC111197894
cit-r.1	102617226	uncharacterized LOC102617226
osa-u.5	4331057	uncharacterized LOC4331057
zma-u.5	100275260	uncharacterized LOC100275260
tae-r.2	123139375	uncharacterized LOC123139375
tae-r.2	123146010	uncharacterized LOC123146010
hvu-r.1	123402250	uncharacterized LOC123402250
sbi-r.1	8084664	uncharacterized LOC8084664
bdi-r.1	100832056	uncharacterized LOC100832056
cre-r.1	CHLRE_12g547500v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(632 genes)

IEA

GO MF

Protein

XP_004235948.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for XP_004235948.1)

Subcellular
localization
TargetP

chlo 2

(predict for XP_004235948.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101248862	sly-r.6 for 101248862	sot-r.1 for 102604155	ath-u.5 for AT3G15900	gma-u.5 for 100527049	vvi-u.5 for 100245821	ppo-u.5 for 18094869	mtr-u.5 for 11432530	ghi-r.1 for 107889143	ghi-r.1 for 107891674	bna-r.1 for BNAC01G35640D	bna-r.1 for 111197894	cit-r.1 for 102617226	osa-u.5 for 4331057	zma-u.5 for 100275260	tae-r.2 for 123139375	tae-r.2 for 123146010	hvu-r.1 for 123402250	sbi-r.1 for 8084664	bdi-r.1 for 100832056	cre-r.1 for CHLRE_12g547500v5

Ortholog

Ortholog ID: 10770

Species

sly

sot

ath

gma

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101248862

uncharacterized LOC102604155

homoserine O-acetyltransferase

uncharacterized LOC100527049

uncharacterized LOC100245821

uncharacterized LOC18094869

uncharacterized LOC11432530

uncharacterized LOC107889143

uncharacterized LOC107891674

uncharacterized BNAC01G35640D

uncharacterized LOC111197894

uncharacterized LOC102617226

uncharacterized LOC4331057

uncharacterized LOC100275260

uncharacterized LOC123146010

uncharacterized LOC123128867

uncharacterized LOC123402250

uncharacterized LOC8084664

uncharacterized LOC100832056

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	9
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00630	Glyoxylate and dicarboxylate metabolism	5
ath01200	Carbon metabolism	5
ath00785	Lipoic acid metabolism	3
ath00260	Glycine, serine and threonine metabolism	3
ath00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2
ppo00270	Cysteine and methionine metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	4
bna00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	12
sbi00860	Porphyrin metabolism	2
sbi01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

101248862

102604155

820833

100527049

100245821

18094869

11432530

107889143

107891674

106377395

111197894

102617226

4331057

100275260

123146010

123128867

123402250

8084664

100832056

5719608

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101248862 (sly-u.5 coexpression data)

Top 50 enrichment test to 101248862 (sly-u.5 coexpression data)


Species	sly	sot	ath	gma	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre	bra	nta
Paralog	2	1	1	1	1	1	1	2	2	1	1	1	2	1	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101248862 (sly-u.5 coexpression data)

Top 50 enrichment test to 101248862 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**