Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085027   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 sbi-r.1   8074100   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 zma-u.5   103650710   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 zma-u.5   103641135   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 osa-u.5   4330137   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 osa-u.5   107278409   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 tae-r.2   123167416   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 tae-r.2   123157374   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 tae-r.2   123150866   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 hvu-r.1   123401795   pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like 
 bdi-r.1   100845529   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 mtr-u.5   25479609   pentatricopeptide repeat-containing protein At3g60050 

close


Top 50 coexpressed genes to 8085027 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8085027 (sbi-r.1 coexpression data)

CoexMap"8085027"


sbiLOC8085027 | Entrez gene ID : 8085027      
Species sbi zma osa tae hvu bdi mtr gma cit sly sot bra ath bna ppo vvi ghi cre nta
Paralog 2 2 2 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002444001.1 [sequence] [blastp]
XP_021320493.1 [sequence] [blastp]
XP_021320494.1 [sequence] [blastp]
XP_021320495.1 [sequence] [blastp]
XP_021320496.1 [sequence] [blastp]
XP_021320497.1 [sequence] [blastp]
XP_021320498.1 [sequence] [blastp]
XP_021320499.1 [sequence] [blastp]
XP_021320500.1 [sequence] [blastp]
XP_021320501.1 [sequence] [blastp]
XP_021320502.1 [sequence] [blastp]
XP_021320503.1 [sequence] [blastp]
XP_021320504.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_002444001.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320493.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320494.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320495.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320496.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320497.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320498.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320499.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320500.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320501.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320502.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320503.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_021320504.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002444001.1)
mito 8  (predict for XP_021320493.1)
mito 8  (predict for XP_021320494.1)
mito 8  (predict for XP_021320495.1)
mito 8  (predict for XP_021320496.1)
mito 8  (predict for XP_021320497.1)
mito 8  (predict for XP_021320498.1)
mito 8  (predict for XP_021320499.1)
mito 8  (predict for XP_021320500.1)
mito 8  (predict for XP_021320501.1)
mito 8  (predict for XP_021320502.1)
mito 8  (predict for XP_021320503.1)
mito 8  (predict for XP_021320504.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085027
sbi-r.1
for
8074100
zma-u.5
for
103650710
zma-u.5
for
103641135
osa-u.5
for
4330137
osa-u.5
for
107278409
tae-r.2
for
123167416
tae-r.2
for
123157374
tae-r.2
for
123150866
hvu-r.1
for
123401795
bdi-r.1
for
100845529
mtr-u.5
for
25479609


Ortholog ID: 12794
Species sbi sbi zma zma osa osa tae hvu bdi mtr
Symbol LOC8085027 LOC8074100 LOC103650710 LOC103641135 LOC4330137 LOC107278409 LOC123150866 LOC123401795 LOC100845529 LOC11416155
Function* pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At1g63080, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8085027 8074100 103650710 103641135 4330137 107278409 123150866 123401795 100845529 11416155
The preparation time of this page was 0.1 [sec].