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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123157374   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 tae-r.2   123167416   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 tae-r.2   123150866   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 hvu-r.1   123401795   pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like 
 bdi-r.1   100845529   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 osa-u.5   4330137   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 osa-u.5   107278409   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 zma-u.5   103650710   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 zma-u.5   103641135   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 sbi-r.1   8085027   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 sbi-r.1   8074100   pentatricopeptide repeat-containing protein At2g26790, mitochondrial 
 mtr-u.5   25479609   pentatricopeptide repeat-containing protein At3g60050 

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Top 50 coexpressed genes to 123157374 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123157374 (tae-r.2 coexpression data)

CoexMap"123157374"


taeLOC123157374 | Entrez gene ID : 123157374    
Species tae hvu bdi osa zma sbi mtr gma bra sot cre ghi ppo sly cit ath nta bna vvi
Paralog 3 1 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (40 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (43 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044431574.1 [sequence] [blastp]
XP_044431575.1 [sequence] [blastp]
XP_044431576.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto_mito 1,  nucl_plas 1,  mito 1,  plas 1  (predict for XP_044431574.1)
chlo 4,  nucl 2,  cyto_mito 1,  nucl_plas 1,  mito 1,  plas 1  (predict for XP_044431575.1)
chlo 4,  nucl 2,  cyto_mito 1,  nucl_plas 1,  mito 1,  plas 1  (predict for XP_044431576.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_044431574.1)
mito 8,  chlo 3  (predict for XP_044431575.1)
mito 8,  chlo 3  (predict for XP_044431576.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123157374
tae-r.2
for
123167416
tae-r.2
for
123150866
hvu-r.1
for
123401795
bdi-r.1
for
100845529
osa-u.5
for
4330137
osa-u.5
for
107278409
zma-u.5
for
103650710
zma-u.5
for
103641135
sbi-r.1
for
8085027
sbi-r.1
for
8074100
mtr-u.5
for
25479609


Ortholog ID: 12794
Species tae hvu bdi osa osa zma zma sbi sbi mtr
Symbol LOC123150866 LOC123401795 LOC100845529 LOC4330137 LOC107278409 LOC103650710 LOC103641135 LOC8085027 LOC8074100 LOC11416155
Function* pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At2g26790, mitochondrial pentatricopeptide repeat-containing protein At1g63080, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123150866 123401795 100845529 4330137 107278409 103650710 103641135 8085027 8074100 11416155
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