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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085614   pentatricopeptide repeat-containing protein At1g52620 
 zma-u.5   103654325   pentatricopeptide repeat-containing protein At1g52620 
 osa-u.5   9267287   pentatricopeptide repeat-containing protein At1g52620 
 osa-u.5   9268419   pentatricopeptide repeat-containing protein At1g52620 
 tae-r.2   123111256   pentatricopeptide repeat-containing protein At1g52620 
 tae-r.2   123120472   pentatricopeptide repeat-containing protein At1g52620 
 hvu-r.1   123395299   pentatricopeptide repeat-containing protein At1g52620 
 bdi-r.1   100822788   pentatricopeptide repeat-containing protein At1g52620 
 ath-u.5   AT1G52620   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100800298   pentatricopeptide repeat-containing protein At1g52620 
 sly-u.5   101256668   pentatricopeptide repeat-containing protein At1g52620 
 bra-r.6   103871201   pentatricopeptide repeat-containing protein At1g52620 
 vvi-u.5   100853298   pentatricopeptide repeat-containing protein At1g52620 
 ppo-u.5   18094140   pentatricopeptide repeat-containing protein At1g52620 
 mtr-u.5   11433580   pentatricopeptide repeat-containing protein At1g52620 
 ghi-r.1   107897364   pentatricopeptide repeat-containing protein At1g52620-like 
 ghi-r.1   107916341   pentatricopeptide repeat-containing protein At1g52620 
 bna-r.1   106402886   pentatricopeptide repeat-containing protein At1g52620 
 sot-r.1   102595842   pentatricopeptide repeat-containing protein At1g52620 
 cit-r.1   102623768   pentatricopeptide repeat-containing protein At1g52620 
 nta-r.1   107772391   uncharacterized LOC107772391 
 nta-r.1   107779851   uncharacterized LOC107779851 

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Top 50 coexpressed genes to 8085614 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085614 (sbi-r.1 coexpression data)

CoexMap"8085614"


sbiLOC8085614 | Entrez gene ID : 8085614    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 2 2 1 1 1 1 1 1 1 1 1 2 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002450227.2 [sequence] [blastp]
XP_021316305.1 [sequence] [blastp]
XP_021316306.1 [sequence] [blastp]
XP_021316307.1 [sequence] [blastp]
XP_021316308.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for XP_002450227.2)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for XP_021316305.1)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for XP_021316306.1)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for XP_021316307.1)
cyto 5,  nucl 4,  chlo 1,  cysk 1  (predict for XP_021316308.1)
Subcellular
localization
TargetP
other 4  (predict for XP_002450227.2)
other 4  (predict for XP_021316305.1)
other 4  (predict for XP_021316306.1)
other 4  (predict for XP_021316307.1)
other 4  (predict for XP_021316308.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085614
zma-u.5
for
103654325
osa-u.5
for
9267287
osa-u.5
for
9268419
tae-r.2
for
123111256
tae-r.2
for
123120472
hvu-r.1
for
123395299
bdi-r.1
for
100822788
ath-u.5
for
AT1G52620
gma-u.5
for
100800298
sly-u.5
for
101256668
bra-r.6
for
103871201
vvi-u.5
for
100853298
ppo-u.5
for
18094140
mtr-u.5
for
11433580
ghi-r.1
for
107897364
ghi-r.1
for
107916341
bna-r.1
for
106402886
sot-r.1
for
102595842
cit-r.1
for
102623768
nta-r.1
for
107772391
nta-r.1
for
107779851


Ortholog ID: 11087
Species sbi zma osa osa tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna sot cit nta nta
Symbol LOC8085614 LOC103654325 LOC9267287 LOC9268419 LOC123111256 LOC123120472 LOC123395299 LOC100822788 AT1G52620 LOC100800298 LOC101256668 LOC103871201 LOC100853298 LOC18094140 LOC11433580 LOC107897364 LOC107916341 LOC106402886 LOC102595842 LOC102623768 LOC107772391 LOC107779851
Function* pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620-like pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 pentatricopeptide repeat-containing protein At1g52620 uncharacterized LOC107772391 uncharacterized LOC107779851
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8085614 103654325 9267287 9268419 123111256 123120472 123395299 100822788 841694 100800298 101256668 103871201 100853298 18094140 11433580 107897364 107916341 106402886 102595842 102623768 107772391 107779851
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