ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8086276	probable methyltransferase PMT21
zma-u.5	100285922	ankyrin protein kinase-like
osa-u.5	9272129	probable methyltransferase PMT20
tae-r.2	123181522	probable methyltransferase PMT21
tae-r.2	123051008	probable methyltransferase PMT21
tae-r.2	123126859	probable methyltransferase PMT21
hvu-r.1	123437210	probable methyltransferase PMT21
bdi-r.1	100823999	probable methyltransferase PMT21
ath-u.5	ERD3	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT1G31850	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100820623	probable methyltransferase PMT20
gma-u.5	100810681	probable methyltransferase PMT20
gma-u.5	100807458	probable methyltransferase PMT20
sly-u.5	101251208	probable methyltransferase PMT21
sly-u.5	101246361	probable methyltransferase PMT20
bra-r.6	103834104	probable methyltransferase PMT21
bra-r.6	103840212	probable methyltransferase PMT20
bra-r.6	103857117	probable methyltransferase PMT21
vvi-u.5	100251016	probable methyltransferase PMT20
ppo-u.5	18094072	probable methyltransferase PMT20
ppo-u.5	7465473	probable methyltransferase PMT21
mtr-u.5	11409459	probable methyltransferase PMT21
mtr-u.5	25501570	probable methyltransferase PMT21
ghi-r.1	107947370	probable methyltransferase PMT21
ghi-r.1	107946807	probable methyltransferase PMT21
ghi-r.1	107929460	probable methyltransferase PMT21
bna-r.1	106360923	probable methyltransferase PMT21
bna-r.1	125575005	probable methyltransferase PMT21
bna-r.1	125575120	probable methyltransferase PMT20
sot-r.1	102581285	probable methyltransferase PMT21
sot-r.1	102605358	probable methyltransferase PMT20
cit-r.1	102625513	probable methyltransferase PMT20
nta-r.1	107800421	putative methyltransferase PMT20
nta-r.1	107793763	putative methyltransferase PMT21
nta-r.1	107791697	putative methyltransferase PMT20

Top 50 coexpressed genes to 8086276 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8086276 (sbi-r.1 coexpression data)

CoexMap"8086276"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(105 genes)	IEA
GO:0005768 [list] [network] endosome	(165 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4816 genes)	IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(292 genes)

IEA

Protein

XP_002467415.1 [sequence] [blastp]
XP_021306829.1 [sequence] [blastp]
XP_021306830.1 [sequence] [blastp]
XP_021306831.1 [sequence] [blastp]
XP_021306832.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 4, nucl 1, cyto 1, cyto_nucl 1, chlo 1, mito 1, plas 1, pero 1, chlo_mito 1, cysk_nucl 1, mito_plas 1	(predict for XP_002467415.1)
E.R. 4, nucl 1, cyto 1, cyto_nucl 1, chlo 1, mito 1, plas 1, pero 1, chlo_mito 1, cysk_nucl 1, mito_plas 1	(predict for XP_021306829.1)
E.R. 4, nucl 1, cyto 1, cyto_nucl 1, chlo 1, mito 1, plas 1, pero 1, chlo_mito 1, cysk_nucl 1, mito_plas 1	(predict for XP_021306830.1)
E.R. 4, nucl 1, cyto 1, cyto_nucl 1, chlo 1, mito 1, plas 1, pero 1, chlo_mito 1, cysk_nucl 1, mito_plas 1	(predict for XP_021306831.1)
E.R. 4, cyto 2, nucl 1, cyto_pero 1, chlo 1, mito 1, pero 1, golg 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_021306832.1)

Subcellular
localization
TargetP

other 7, mito 3	(predict for XP_002467415.1)
other 7, mito 3	(predict for XP_021306829.1)
other 7, mito 3	(predict for XP_021306830.1)
other 7, mito 3	(predict for XP_021306831.1)
other 7, mito 3	(predict for XP_021306832.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8086276	zma-u.5 for 100285922	osa-u.5 for 9272129	tae-r.2 for 123181522	tae-r.2 for 123051008	tae-r.2 for 123126859	hvu-r.1 for 123437210	bdi-r.1 for 100823999	ath-u.5 for ERD3	ath-u.5 for AT1G31850	gma-u.5 for 100820623	gma-u.5 for 100810681	gma-u.5 for 100807458	sly-u.5 for 101251208	sly-u.5 for 101246361	bra-r.6 for 103834104	bra-r.6 for 103840212	bra-r.6 for 103857117	vvi-u.5 for 100251016	ppo-u.5 for 18094072	ppo-u.5 for 7465473	mtr-u.5 for 11409459	mtr-u.5 for 25501570	ghi-r.1 for 107947370	ghi-r.1 for 107946807	ghi-r.1 for 107929460	bna-r.1 for 106360923	bna-r.1 for 125575005	bna-r.1 for 125575120	sot-r.1 for 102581285	sot-r.1 for 102605358	cit-r.1 for 102625513	nta-r.1 for 107800421	nta-r.1 for 107793763	nta-r.1 for 107791697

Ortholog

Ortholog ID: 3248

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

ERD3

Function^*