ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100251016	probable methyltransferase PMT20
vvi-r.5	100251016	probable methyltransferase PMT20
vvi-m.5	100251016	probable methyltransferase PMT20
ath-u.5	ERD3	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT1G31850	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100820623	probable methyltransferase PMT20
gma-u.5	100810681	probable methyltransferase PMT20
gma-u.5	100807458	probable methyltransferase PMT20
bra-r.6	103868927	probable methyltransferase PMT20
bra-r.6	103834104	probable methyltransferase PMT21
bra-r.6	103840212	probable methyltransferase PMT20
ppo-u.5	7465473	probable methyltransferase PMT21
ppo-u.5	18094072	probable methyltransferase PMT20
mtr-u.5	25501570	probable methyltransferase PMT21
mtr-u.5	11409459	probable methyltransferase PMT21
ghi-r.1	107900679	probable methyltransferase PMT21
ghi-r.1	107929460	probable methyltransferase PMT21
ghi-r.1	107946807	probable methyltransferase PMT21
bna-r.1	106360923	probable methyltransferase PMT21
bna-r.1	125575005	probable methyltransferase PMT21
bna-r.1	125575120	probable methyltransferase PMT20
cit-r.1	102625513	probable methyltransferase PMT20
sly-u.5	101251208	probable methyltransferase PMT21
sly-u.5	101246361	probable methyltransferase PMT20
sot-r.1	102581285	probable methyltransferase PMT21
sot-r.1	102605358	probable methyltransferase PMT20
nta-r.1	107800421	putative methyltransferase PMT20
nta-r.1	107793763	putative methyltransferase PMT21
nta-r.1	107791697	putative methyltransferase PMT20
osa-u.5	9272129	probable methyltransferase PMT20
zma-u.5	100285922	ankyrin protein kinase-like
tae-r.2	123051008	probable methyltransferase PMT21
tae-r.2	123126859	probable methyltransferase PMT21
tae-r.2	123181522	probable methyltransferase PMT21
hvu-r.1	123437210	probable methyltransferase PMT21
sbi-r.1	8086276	probable methyltransferase PMT21
bdi-r.1	100823999	probable methyltransferase PMT21

Top 50 coexpressed genes to 100251016 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100251016 (vvi-u.5 coexpression data)

CoexMap"100251016"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(122 genes)	IEA
GO:0005768 [list] [network] endosome	(148 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4496 genes)	IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(310 genes)

IEA

Protein

XP_002265127.1 [sequence] [blastp]
XP_019080880.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, E.R. 2, nucl_plas 2, cyto_plas 2	(predict for XP_002265127.1)
nucl 3, cyto 3, cyto_nucl 3, E.R. 2, nucl_plas 2, cyto_plas 2	(predict for XP_019080880.1)

Subcellular
localization
TargetP

other 6	(predict for XP_002265127.1)
other 6	(predict for XP_019080880.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100251016	vvi-r.5 for 100251016	vvi-m.5 for 100251016	ath-u.5 for ERD3	ath-u.5 for AT1G31850	gma-u.5 for 100820623	gma-u.5 for 100810681	gma-u.5 for 100807458	bra-r.6 for 103868927	bra-r.6 for 103834104	bra-r.6 for 103840212	ppo-u.5 for 7465473	ppo-u.5 for 18094072	mtr-u.5 for 25501570	mtr-u.5 for 11409459	ghi-r.1 for 107900679	ghi-r.1 for 107929460	ghi-r.1 for 107946807	bna-r.1 for 106360923	bna-r.1 for 125575005	bna-r.1 for 125575120	cit-r.1 for 102625513	sly-u.5 for 101251208	sly-u.5 for 101246361	sot-r.1 for 102581285	sot-r.1 for 102605358	nta-r.1 for 107800421	nta-r.1 for 107793763	nta-r.1 for 107791697	osa-u.5 for 9272129	zma-u.5 for 100285922	tae-r.2 for 123051008	tae-r.2 for 123126859	tae-r.2 for 123181522	hvu-r.1 for 123437210	sbi-r.1 for 8086276	bdi-r.1 for 100823999

Ortholog

Ortholog ID: 3248

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

ERD3

Function^*