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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579775   50S ribosomal protein L28, chloroplastic 
 sly-u.5   101258785   large ribosomal subunit protein bL28c 
 nta-r.1   107806723   50S ribosomal protein L28, chloroplastic 
 nta-r.1   107759172   large ribosomal subunit protein bL28c-like 
 ath-u.5   PRPL28   Ribosomal L28 family 
 gma-u.5   100804320   50S ribosomal protein L28, chloroplastic-like 
 bra-r.6   103865271   50S ribosomal protein L28, chloroplastic 
 vvi-u.5   100244165   large ribosomal subunit protein bL28c 
 ppo-u.5   7475408   50S ribosomal protein L28, chloroplastic 
 mtr-u.5   25482948   50S ribosomal protein L28, chloroplastic 
 ghi-r.1   107942210   50S ribosomal protein L28, chloroplastic 
 ghi-r.1   107896702   50S ribosomal protein L28, chloroplastic 
 ghi-r.1   107914940   50S ribosomal protein L28, chloroplastic 
 bna-r.1   106447174   50S ribosomal protein L28, chloroplastic-like 
 bna-r.1   106454727   50S ribosomal protein L28, chloroplastic 
 bna-r.1   106375847   50S ribosomal protein L28, chloroplastic 
 cit-r.1   102615186   50S ribosomal protein L28, chloroplastic 
 osa-u.5   4337526   large ribosomal subunit protein bL28c 
 zma-u.5   100283221   50S ribosomal protein L28, chloroplastic-like 
 zma-u.5   100281641   50S ribosomal protein L28, chloroplastic-like 
 tae-r.2   123179746   50S ribosomal protein L28, chloroplastic 
 tae-r.2   123102343   50S ribosomal protein L28, chloroplastic 
 hvu-r.1   123403204   50S ribosomal protein L28, chloroplastic 
 sbi-r.1   8064876   50S ribosomal protein L28, chloroplastic 
 cre-r.1   CHLRE_06g265800v5   uncharacterized protein 

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Top 50 coexpressed genes to 102579775 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579775 (sot-r.1 coexpression data)

CoexMap"102579775"


sotLOC102579775 | Entrez gene ID : 102579775      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi cre bdi
Paralog 1 1 2 1 1 1 1 1 1 3 3 1 1 2 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03010 [list] [network] Ribosome (406 genes)
GO BP
GO:0006412 [list] [network] translation  (522 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (378 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (377 genes)  IEA  
Protein XP_006354458.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006354458.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006354458.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579775
sly-u.5
for
101258785
nta-r.1
for
107806723
nta-r.1
for
107759172
ath-u.5
for
PRPL28
gma-u.5
for
100804320
bra-r.6
for
103865271
vvi-u.5
for
100244165
ppo-u.5
for
7475408
mtr-u.5
for
25482948
ghi-r.1
for
107942210
ghi-r.1
for
107896702
ghi-r.1
for
107914940
bna-r.1
for
106447174
bna-r.1
for
106454727
bna-r.1
for
106375847
cit-r.1
for
102615186
osa-u.5
for
4337526
zma-u.5
for
100283221
zma-u.5
for
100281641
tae-r.2
for
123179746
tae-r.2
for
123102343
hvu-r.1
for
123403204
sbi-r.1
for
8064876
cre-r.1
for
CHLRE_06g265800v5


Ortholog ID: 7530
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi ghi bna bna bna cit osa zma zma tae tae hvu sbi cre
Symbol LOC102579775 LOC101258785 LOC107806723 LOC107759172 PRPL28 LOC100804320 LOC103865271 LOC100244165 LOC7475408 LOC25482948 LOC107942210 LOC107896702 LOC107914940 LOC106447174 LOC106454727 LOC106375847 LOC102615186 LOC4337526 LOC100283221 LOC100281641 LOC123102343 LOC123183831 LOC123403204 LOC8064876 CHLRE_06g265800v5
Function* 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c-like Ribosomal L28 family 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102579775 101258785 107806723 107759172 817910 100804320 103865271 100244165 7475408 25482948 107942210 107896702 107914940 106447174 106454727 106375847 102615186 4337526 100283221 100281641 123102343 123183831 123403204 8064876 5721948
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