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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475408   50S ribosomal protein L28, chloroplastic 
 ppo-r.4   7475408   50S ribosomal protein L28, chloroplastic 
 ppo-m.4   7475408   50S ribosomal protein L28, chloroplastic 
 gma-u.5   100804320   50S ribosomal protein L28, chloroplastic-like 
 mtr-u.5   25482948   50S ribosomal protein L28, chloroplastic 
 ath-u.5   PRPL28   Ribosomal L28 family 
 vvi-u.5   100244165   large ribosomal subunit protein bL28c 
 sly-u.5   101258785   large ribosomal subunit protein bL28c 
 osa-u.5   4337526   large ribosomal subunit protein bL28c 
 zma-u.5   100283221   50S ribosomal protein L28, chloroplastic-like 
 zma-u.5   100281641   50S ribosomal protein L28, chloroplastic-like 

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Top 50 coexpressed genes to 7475408 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475408 (ppo-u.5 coexpression data)

CoexMap"7475408"


ppoLOC7475408 | Entrez gene ID : 7475408    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002315574.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002315574.2)
Subcellular
localization
TargetP
other 2  (predict for XP_002315574.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475408

.
ppo-r.4
for
7475408

.
ppo-m.4
for
7475408

.
gma-u.5
for
100804320

.
mtr-u.5
for
25482948

.
ath-u.5
for
PRPL28

.
vvi-u.5
for
100244165

.
sly-u.5
for
101258785

.
osa-u.5
for
4337526

.
zma-u.5
for
100283221

.
zma-u.5
for
100281641

.


Ortholog ID: 7530
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit nta nta
Symbol PRPL28 LOC100804320 LOC101258785 LOC4337526 LOC100281641 LOC103865271 LOC100244165 LOC7475408 LOC25482948 LOC123102343 LOC123403204 LOC107942210 LOC107896702 LOC106447174 LOC106375847 CHLRE_06g265800v5 LOC8064876 LOC102579775 LOC102615186 LOC107806723 LOC107759172
Function* Ribosomal L28 family 50S ribosomal protein L28, chloroplastic-like large ribosomal subunit protein bL28c large ribosomal subunit protein bL28c 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic-like 50S ribosomal protein L28, chloroplastic uncharacterized protein 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic 50S ribosomal protein L28, chloroplastic large ribosomal subunit protein bL28c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817910 100804320 101258785 4337526 100281641 103865271 100244165 7475408 25482948 123102343 123403204 107942210 107896702 106447174 106375847 5721948 8064876 102579775 102615186 107806723 107759172
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