Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102582833   pentatricopeptide repeat-containing protein At1g50270-like 
 sly-u.5   101247439   F-box protein SKIP1 
 gma-u.5   102664320   pentatricopeptide repeat-containing protein At5g56310 
 vvi-u.5   100262320   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11420982   pentatricopeptide repeat-containing protein At5g56310 
 ghi-r.1   107913500   pentatricopeptide repeat-containing protein At5g66520 
 ghi-r.1   107951984   pentatricopeptide repeat-containing protein At5g66520 
 cit-r.1   102624613   pentatricopeptide repeat-containing protein At2g33760-like 

close


Top 50 coexpressed genes to 102582833 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102582833 (sot-r.1 coexpression data)

CoexMap"102582833"


sotLOC102582833 | Entrez gene ID : 102582833      
Species sot sly gma vvi mtr ghi cit cre bra ppo ath hvu nta bna tae bdi osa zma sbi
Paralog 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006343635.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_006343635.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006343635.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102582833
sly-u.5
for
101247439
gma-u.5
for
102664320
vvi-u.5
for
100262320
mtr-u.5
for
11420982
ghi-r.1
for
107913500
ghi-r.1
for
107951984
cit-r.1
for
102624613


Ortholog ID: 14231
Species sot sly gma vvi mtr ghi ghi cit
Symbol LOC102582833 LOC101247439 LOC102664320 LOC100262320 LOC11420982 LOC107913500 LOC107951984 LOC102624613
Function* pentatricopeptide repeat-containing protein At1g50270-like F-box protein SKIP1 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At2g33760-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 3
mtr01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102582833 101247439 102664320 100262320 11420982 107913500 107951984 102624613
The preparation time of this page was 0.1 [sec].