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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247439   F-box protein SKIP1 
 sly-r.6   101247439   F-box protein SKIP1 
 sly-m.5   101247439   F-box protein SKIP1 
 gma-u.5   102664320   pentatricopeptide repeat-containing protein At5g56310 
 vvi-u.5   100262320   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11420982   pentatricopeptide repeat-containing protein At5g56310 

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Top 50 coexpressed genes to 101247439 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247439 (sly-u.5 coexpression data)

CoexMap"101247439"


slyLOC101247439 | Entrez gene ID : 101247439    
Species sly gma vvi mtr tae osa hvu zma ghi bdi cit ath bra cre sbi ppo bna nta sot
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010323191.2 [sequence] [blastp]
XP_019070395.2 [sequence] [blastp]
XP_019070396.2 [sequence] [blastp]
XP_069143007.1 [sequence] [blastp]
XP_069143008.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_010323191.2)
chlo 4,  nucl 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_019070395.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_019070396.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_069143007.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_069143008.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_010323191.2)
chlo 3  (predict for XP_019070395.2)
other 8  (predict for XP_019070396.2)
other 8  (predict for XP_069143007.1)
other 8  (predict for XP_069143008.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247439

.
sly-r.6
for
101247439

.
sly-m.5
for
101247439

.
gma-u.5
for
102664320

.
vvi-u.5
for
100262320

.
mtr-u.5
for
11420982

.


Ortholog ID: 14231
Species gma sly vvi mtr ghi ghi sot cit
Symbol LOC102664320 LOC101247439 LOC100262320 LOC11420982 LOC107913500 LOC107951984 LOC102582833 LOC102624613
Function* pentatricopeptide repeat-containing protein At5g56310 F-box protein SKIP1 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g56310 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At1g50270-like pentatricopeptide repeat-containing protein At2g33760-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 3
mtr01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102664320 101247439 100262320 11420982 107913500 107951984 102582833 102624613
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