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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102584736   pentatricopeptide repeat-containing protein At4g21170 
 sly-u.5   101258435   pentatricopeptide repeat-containing protein At4g21170 
 nta-r.1   107785389   pentatricopeptide repeat-containing protein At4g21170-like 
 nta-r.1   107819374   pentatricopeptide repeat-containing protein At4g21170-like 
 ath-u.5   AT4G21170   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103858793   pentatricopeptide repeat-containing protein At4g21170 
 vvi-u.5   100262439   pentatricopeptide repeat-containing protein At4g21170 
 ppo-u.5   7479086   pentatricopeptide repeat-containing protein At4g21170 
 ghi-r.1   107958251   pentatricopeptide repeat-containing protein At4g21170 
 bna-r.1   106440332   pentatricopeptide repeat-containing protein At4g21170-like 
 bna-r.1   106375695   pentatricopeptide repeat-containing protein At4g21170 
 cit-r.1   102629430   pentatricopeptide repeat-containing protein At4g21170 

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Top 50 coexpressed genes to 102584736 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102584736 (sot-r.1 coexpression data)

CoexMap"102584736"


sotLOC102584736 | Entrez gene ID : 102584736      
Species sot sly nta ath bra vvi ppo ghi bna cit cre hvu mtr tae bdi osa gma zma sbi
Paralog 1 1 2 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006348079.1 [sequence] [blastp]
XP_006348080.1 [sequence] [blastp]
XP_006348081.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_006348079.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_006348080.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_006348081.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_006348079.1)
chlo 3  (predict for XP_006348080.1)
chlo 3  (predict for XP_006348081.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102584736
sly-u.5
for
101258435
nta-r.1
for
107785389
nta-r.1
for
107819374
ath-u.5
for
AT4G21170
bra-r.6
for
103858793
vvi-u.5
for
100262439
ppo-u.5
for
7479086
ghi-r.1
for
107958251
bna-r.1
for
106440332
bna-r.1
for
106375695
cit-r.1
for
102629430


Ortholog ID: 14038
Species sot sly nta nta ath bra vvi ppo ghi bna bna cit
Symbol LOC102584736 LOC101258435 LOC107785389 LOC107819374 AT4G21170 LOC103858793 LOC100262439 LOC7479086 LOC107958251 LOC106440332 LOC106375695 LOC102629430
Function* pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170-like pentatricopeptide repeat-containing protein At4g21170-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170-like pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102584736 101258435 107785389 107819374 827865 103858793 100262439 7479086 107958251 106440332 106375695 102629430
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