ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102584910	uncharacterized LOC102584910
sly-u.5	101261879	uncharacterized LOC101261879
nta-r.1	107821680	uncharacterized LOC107821680
nta-r.1	107766772	uncharacterized LOC107766772
ath-u.5	AT5G12920	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100780441	uncharacterized LOC100780441
vvi-u.5	100243206	uncharacterized LOC100243206
mtr-u.5	25492608	uncharacterized LOC25492608
ghi-r.1	107891392	uncharacterized LOC107891392
ghi-r.1	121220888	uncharacterized LOC121220888
ghi-r.1	107889345	uncharacterized LOC107889345
cit-r.1	102623138	hypothetical protein
osa-u.5	4329830	uncharacterized LOC4329830
zma-u.5	100382616	uncharacterized LOC100382616
tae-r.2	123144666	uncharacterized LOC123144666
tae-r.2	123137161	uncharacterized LOC123137161
hvu-r.1	123404766	uncharacterized LOC123404766
sbi-r.1	8070584	uncharacterized LOC8070584
bdi-r.1	100823800	uncharacterized LOC100823800

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4214 genes)

IEA

Protein

XP_015159335.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, chlo 2, nucl 1, chlo_mito 1, cyto 1, mito 1, plas 1, vacu 1, E.R. 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_015159335.1)

Subcellular
localization
TargetP

other 8

(predict for XP_015159335.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102584910	sly-u.5 for 101261879	nta-r.1 for 107821680	nta-r.1 for 107766772	ath-u.5 for AT5G12920	gma-u.5 for 100780441	vvi-u.5 for 100243206	mtr-u.5 for 25492608	ghi-r.1 for 107891392	ghi-r.1 for 121220888	ghi-r.1 for 107889345	cit-r.1 for 102623138	osa-u.5 for 4329830	zma-u.5 for 100382616	tae-r.2 for 123144666	tae-r.2 for 123137161	hvu-r.1 for 123404766	sbi-r.1 for 8070584	bdi-r.1 for 100823800

Ortholog

Ortholog ID: 11403

Species

sot

sly

nta

ath

gma

vvi

mtr

ghi

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102584910

uncharacterized LOC101261879

uncharacterized LOC107821680

uncharacterized LOC107766772

Transducin/WD40 repeat-like superfamily protein

uncharacterized LOC100780441

uncharacterized LOC100243206

uncharacterized LOC25492608

uncharacterized LOC107891392

uncharacterized LOC121220888

uncharacterized LOC107889345

hypothetical protein

uncharacterized LOC4329830

uncharacterized LOC100382616

uncharacterized LOC123144666

uncharacterized LOC123137161

uncharacterized LOC123404766

uncharacterized LOC8070584

uncharacterized LOC100823800

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	2
sot03410	Base excision repair	2
sot03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03460	Fanconi anemia pathway	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	9
ath03440	Homologous recombination	3
ath03460	Fanconi anemia pathway	3
ath03420	Nucleotide excision repair	3
ath03430	Mismatch repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	13
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	6
vvi03410	Base excision repair	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	10
ghi03410	Base excision repair	6
ghi03420	Nucleotide excision repair	4
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	7
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03430	Mismatch repair	6
zma03030	DNA replication	5
zma03410	Base excision repair	4
zma03420	Nucleotide excision repair	4
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	5
bdi00300	Lysine biosynthesis	3
bdi03440	Homologous recombination	2
bdi03460	Fanconi anemia pathway	2

Expression

Expression pattern

Entrez Gene ID^*

102584910

101261879

107821680

107766772

831132

100780441

100243206

25492608

107891392

121220888

107889345

102623138

4329830

100382616

123144666

123137161

123404766

8070584

100823800

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102584910 (sot-r.1 coexpression data)

Top 50 enrichment test to 102584910 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	vvi	mtr	ghi	cit	osa	zma	tae	hvu	sbi	bdi	cre	bna	bra	ppo
Paralog	1	1	2	1	1	1	1	3	1	1	1	2	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102584910 (sot-r.1 coexpression data)

Top 50 enrichment test to 102584910 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**