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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102590936   pentatricopeptide repeat-containing protein At3g61360 
 sly-u.5   101264923   pentatricopeptide repeat-containing protein At3g61360 
 nta-r.1   107817896   pentatricopeptide repeat-containing protein At3g61360 
 nta-r.1   107768244   pentatricopeptide repeat-containing protein At3g61360 
 ath-u.5   AT3G61360   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100778650   pentatricopeptide repeat-containing protein At3g61360 
 bra-r.6   103841958   pentatricopeptide repeat-containing protein At3g61360 
 vvi-u.5   100261288   pentatricopeptide repeat-containing protein At3g61360 
 ppo-u.5   18094061   pentatricopeptide repeat-containing protein At3g61360 
 mtr-u.5   112416267   pentatricopeptide repeat-containing protein At3g61360 
 ghi-r.1   107920387   pentatricopeptide repeat-containing protein At3g61360 
 ghi-r.1   107890461   pentatricopeptide repeat-containing protein At3g61360 
 bna-r.1   106415933   pentatricopeptide repeat-containing protein At3g61360 
 bna-r.1   106415114   pentatricopeptide repeat-containing protein At3g61360-like 
 cit-r.1   102620657   pentatricopeptide repeat-containing protein At3g61360 
 osa-u.5   4341929   pentatricopeptide repeat-containing protein At3g61360 
 zma-u.5   103626368   pentatricopeptide repeat-containing protein At3g61360 
 sbi-r.1   8063806   pentatricopeptide repeat-containing protein At3g61360 
 bdi-r.1   106865643   pentatricopeptide repeat-containing protein At3g61360-like 
 bdi-r.1   100844031   pentatricopeptide repeat-containing protein At3g61360 

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Top 50 coexpressed genes to 102590936 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102590936 (sot-r.1 coexpression data)

CoexMap"102590936"


sotLOC102590936 | Entrez gene ID : 102590936      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma sbi bdi cre tae hvu
Paralog 1 1 2 1 1 1 1 1 1 2 2 1 1 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007005 [list] [network] mitochondrion organization  (86 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (579 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (603 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (296 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006359826.1 [sequence] [blastp]
XP_006359827.1 [sequence] [blastp]
XP_015170063.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto_mito 2,  chlo 2,  cyto 2,  nucl 1  (predict for XP_006359826.1)
mito 4,  cyto_mito 2,  chlo 2,  cyto 2,  nucl 1  (predict for XP_006359827.1)
mito 4,  cyto_mito 2,  chlo 2,  cyto 2,  nucl 1  (predict for XP_015170063.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_006359826.1)
mito 5,  other 3  (predict for XP_006359827.1)
mito 5,  other 3  (predict for XP_015170063.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102590936
sly-u.5
for
101264923
nta-r.1
for
107817896
nta-r.1
for
107768244
ath-u.5
for
AT3G61360
gma-u.5
for
100778650
bra-r.6
for
103841958
vvi-u.5
for
100261288
ppo-u.5
for
18094061
mtr-u.5
for
112416267
ghi-r.1
for
107920387
ghi-r.1
for
107890461
bna-r.1
for
106415933
bna-r.1
for
106415114
cit-r.1
for
102620657
osa-u.5
for
4341929
zma-u.5
for
103626368
sbi-r.1
for
8063806
bdi-r.1
for
106865643
bdi-r.1
for
100844031


Ortholog ID: 12209
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma sbi bdi bdi
Symbol LOC102590936 LOC101264923 LOC107817896 LOC107768244 AT3G61360 LOC100778650 LOC103841958 LOC100261288 LOC18094061 LOC112416267 LOC107920387 LOC107890461 LOC106415933 LOC106415114 LOC102620657 LOC4341929 LOC103626368 LOC8063806 LOC106865643 LOC100844031
Function* pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360-like pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360-like pentatricopeptide repeat-containing protein At3g61360
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102590936 101264923 107817896 107768244 825308 100778650 103841958 100261288 18094061 112416267 107920387 107890461 106415933 106415114 102620657 4341929 103626368 8063806 106865643 100844031
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