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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063806   pentatricopeptide repeat-containing protein At3g61360 
 zma-u.5   103626368   pentatricopeptide repeat-containing protein At3g61360 
 osa-u.5   4341929   pentatricopeptide repeat-containing protein At3g61360 
 ath-u.5   AT3G61360   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100778650   pentatricopeptide repeat-containing protein At3g61360 
 sly-u.5   101264923   pentatricopeptide repeat-containing protein At3g61360 
 vvi-u.5   100261288   pentatricopeptide repeat-containing protein At3g61360 
 ppo-u.5   18094061   pentatricopeptide repeat-containing protein At3g61360 
 mtr-u.5   112416267   pentatricopeptide repeat-containing protein At3g61360 

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Top 50 coexpressed genes to 8063806 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8063806 (sbi-r.1 coexpression data)

CoexMap"8063806"


sbiLOC8063806 | Entrez gene ID : 8063806    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002438925.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_002438925.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002438925.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063806

.
zma-u.5
for
103626368

.
osa-u.5
for
4341929

.
ath-u.5
for
AT3G61360

.
gma-u.5
for
100778650

.
sly-u.5
for
101264923

.
vvi-u.5
for
100261288

.
ppo-u.5
for
18094061

.
mtr-u.5
for
112416267

.


Ortholog ID: 12209
Species ath gma sly osa zma bra vvi ppo mtr ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol AT3G61360 LOC100778650 LOC101264923 LOC4341929 LOC103626368 LOC103841958 LOC100261288 LOC18094061 LOC112416267 LOC107920387 LOC107890461 LOC106415114 LOC106415933 LOC8063806 LOC102590936 LOC102620657 LOC106865643 LOC100844031 LOC107817896 LOC107768244
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360-like pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360-like pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360 pentatricopeptide repeat-containing protein At3g61360
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825308 100778650 101264923 4341929 103626368 103841958 100261288 18094061 112416267 107920387 107890461 106415114 106415933 8063806 102590936 102620657 106865643 100844031 107817896 107768244
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