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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102593610   pentatricopeptide repeat-containing protein At4g18840 
 nta-r.1   107800029   pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like 
 nta-r.1   107791131   pentatricopeptide repeat-containing protein At4g18840-like 
 ath-u.5   AT4G18840   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103856890   pentatricopeptide repeat-containing protein At4g18840 
 vvi-u.5   100248143   pentatricopeptide repeat-containing protein At4g18840 
 ghi-r.1   107889029   pentatricopeptide repeat-containing protein At4g18840-like 
 ghi-r.1   107891760   pentatricopeptide repeat-containing protein At4g18840 
 bna-r.1   106357829   pentatricopeptide repeat-containing protein At4g18840-like 
 bna-r.1   106423192   pentatricopeptide repeat-containing protein At4g18840 

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Top 50 coexpressed genes to 102593610 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102593610 (sot-r.1 coexpression data)

CoexMap"102593610"


sotLOC102593610 | Entrez gene ID : 102593610    
Species sot nta ath bra vvi ghi bna sbi osa gma sly cit mtr tae hvu ppo zma cre bdi
Paralog 1 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006358091.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  extr 2,  chlo_mito 2  (predict for XP_006358091.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006358091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102593610
nta-r.1
for
107800029
nta-r.1
for
107791131
ath-u.5
for
AT4G18840
bra-r.6
for
103856890
vvi-u.5
for
100248143
ghi-r.1
for
107889029
ghi-r.1
for
107891760
bna-r.1
for
106357829
bna-r.1
for
106423192


Ortholog ID: 14748
Species sot nta nta ath bra vvi ghi ghi bna bna
Symbol LOC102593610 LOC107800029 LOC107791131 AT4G18840 LOC103856890 LOC100248143 LOC107889029 LOC107891760 LOC106357829 LOC106423192
Function* pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like pentatricopeptide repeat-containing protein At4g18840-like Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840-like pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840-like pentatricopeptide repeat-containing protein At4g18840
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102593610 107800029 107791131 827618 103856890 100248143 107889029 107891760 106357829 106423192
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