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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889029   pentatricopeptide repeat-containing protein At4g18840-like 
 ghi-r.1   107891760   pentatricopeptide repeat-containing protein At4g18840 
 ath-u.5   AT4G18840   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103856890   pentatricopeptide repeat-containing protein At4g18840 
 bna-r.1   106357829   pentatricopeptide repeat-containing protein At4g18840-like 
 bna-r.1   106423192   pentatricopeptide repeat-containing protein At4g18840 
 vvi-u.5   100248143   pentatricopeptide repeat-containing protein At4g18840 
 sot-r.1   102593610   pentatricopeptide repeat-containing protein At4g18840 
 nta-r.1   107791131   pentatricopeptide repeat-containing protein At4g18840-like 
 nta-r.1   107800029   pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like 

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Top 50 coexpressed genes to 107889029 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889029 (ghi-r.1 coexpression data)

CoexMap"107889029"


ghiLOC107889029 | Entrez gene ID : 107889029    
Species ghi ath bra bna vvi sot nta hvu bdi sly osa tae ppo zma cre mtr sbi gma cit
Paralog 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040932222.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1  (predict for XP_040932222.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040932222.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889029
ghi-r.1
for
107891760
ath-u.5
for
AT4G18840
bra-r.6
for
103856890
bna-r.1
for
106357829
bna-r.1
for
106423192
vvi-u.5
for
100248143
sot-r.1
for
102593610
nta-r.1
for
107791131
nta-r.1
for
107800029


Ortholog ID: 14748
Species ghi ghi ath bra bna bna vvi sot nta nta
Symbol LOC107889029 LOC107891760 AT4G18840 LOC103856890 LOC106357829 LOC106423192 LOC100248143 LOC102593610 LOC107791131 LOC107800029
Function* pentatricopeptide repeat-containing protein At4g18840-like pentatricopeptide repeat-containing protein At4g18840 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840-like pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840 pentatricopeptide repeat-containing protein At4g18840-like pentatricopeptide repeat-containing protein At2g42920, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889029 107891760 827618 103856890 106357829 106423192 100248143 102593610 107791131 107800029
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