ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	psbL	photosystem II protein L
sly-u.5	psbL	photosystem II protein L
nta-r.1	psbL	PSII reaction center subunit XII
ath-u.5	psbL	photosystem II protein L
gma-u.5	psbL	PSII reaction center subunit XII
vvi-u.5	psbL	PSII reaction center subunit XII
ppo-u.5	psbL	photosystem II protein L
mtr-u.5	psbL	photosystem II protein L
cit-r.1	psbL	photosystem II protein L
osa-u.5	psbL	photosystem II protein L
bdi-r.1	psbL	photosystem II protein L

functional annotation

KEGG

sot00195 [list] [network] Photosynthesis (86 genes)

GO BP

GO CC

GO MF

Protein

YP_635654.2 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 2, E.R._plas 2, plas 1, golg 1, chlo 1, nucl 1, mito 1, extr 1, vacu 1, pero 1, chlo_mito 1

(predict for YP_635654.2)

Subcellular
localization
TargetP

scret 7, other 3

(predict for YP_635654.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for psbL	sly-u.5 for psbL	nta-r.1 for psbL	ath-u.5 for psbL	gma-u.5 for psbL	vvi-u.5 for psbL	ppo-u.5 for psbL	mtr-u.5 for psbL	cit-r.1 for psbL	osa-u.5 for psbL	bdi-r.1 for psbL

Ortholog ID: 12281

Species

sot

sly

nta

ath

gma

vvi

ppo

mtr

cit

osa

bdi

Symbol

psbL

Function^*

photosystem II protein L

PSII reaction center subunit XII

photosystem II protein L

PSII reaction center subunit XII

photosystem II protein L

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	7
sot00190	Oxidative phosphorylation	5
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	6
sly00190	Oxidative phosphorylation	2
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	10
nta03010	Ribosome	6
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	7
ath00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	11
vvi01200	Carbon metabolism	3
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi00710	Carbon fixation by Calvin cycle	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8
ppo00195	Photosynthesis	6
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	11
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	10
cit00190	Oxidative phosphorylation	6
cit03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	8
osa03010	Ribosome	4
osa00970	Aminoacyl-tRNA biosynthesis	3
osa00190	Oxidative phosphorylation	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	12
bdi00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

4099992

3950454

800491

844751

3989311

4025052

4929685

5333137

4271220

3131418

6439867

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to psbL (sot-r.1 coexpression data)

Top 50 enrichment test to psbL (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	vvi	ppo	mtr	cit	osa	bdi	tae	bna	zma	cre	sbi	bra	ghi	hvu
Paralog	1	1	1	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to psbL (sot-r.1 coexpression data)

Top 50 enrichment test to psbL (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**