ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	psbL	PSII reaction center subunit XII
sly-u.5	psbL	photosystem II protein L
ath-u.5	psbL	photosystem II protein L
gma-u.5	psbL	PSII reaction center subunit XII
vvi-u.5	psbL	PSII reaction center subunit XII
ppo-u.5	psbL	photosystem II protein L
mtr-u.5	psbL	photosystem II protein L
osa-u.5	psbL	photosystem II protein L

functional annotation

KEGG

nta00195 [list] [network] Photosynthesis (136 genes)

GO BP

GO CC

GO MF

Protein

NP_054515.2 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 2, E.R._plas 2, plas 1, golg 1, chlo 1, nucl 1, mito 1, extr 1, vacu 1, pero 1, chlo_mito 1

(predict for NP_054515.2)

Subcellular
localization
TargetP

scret 7, other 3

(predict for NP_054515.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for psbL .	sly-u.5 for psbL .	ath-u.5 for psbL .	gma-u.5 for psbL .	vvi-u.5 for psbL .	ppo-u.5 for psbL .	mtr-u.5 for psbL .	osa-u.5 for psbL .

Ortholog ID: 12281

Species

ath

gma

sly

osa

vvi

ppo

mtr

sot

cit

bdi

nta

Symbol

psbL

Function^*

photosystem II protein L

PSII reaction center subunit XII

photosystem II protein L

PSII reaction center subunit XII

photosystem II protein L

PSII reaction center subunit XII

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	7
ath00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	6
sly00190	Oxidative phosphorylation	2
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	8
osa03010	Ribosome	4
osa00970	Aminoacyl-tRNA biosynthesis	3
osa00190	Oxidative phosphorylation	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	11
vvi01200	Carbon metabolism	3
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi00710	Carbon fixation by Calvin cycle	2
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	8
ppo00195	Photosynthesis	6
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	11
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	7
sot00190	Oxidative phosphorylation	5
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	10
cit00190	Oxidative phosphorylation	6
cit03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	12
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	10
nta03010	Ribosome	6
nta00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

844751

3989311

3950454

3131418

4025052

4929685

5333137

4099992

4271220

6439867

800491

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to psbL (nta-r.1 coexpression data)

Top 50 enrichment test to psbL (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	sbi	bra	cre	hvu	cit	bdi	sot	zma	tae	bna	ghi
Paralog	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to psbL (nta-r.1 coexpression data)

Top 50 enrichment test to psbL (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**