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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911043   lariat debranching enzyme 
 ghi-r.1   107930812   lariat debranching enzyme 
 ath-u.5   DBR1   debranching enzyme 1 
 bra-r.6   103862082   lariat debranching enzyme 
 bna-r.1   106386230   lariat debranching enzyme 
 bna-r.1   106368694   lariat debranching enzyme 
 bna-r.1   106420285   lariat debranching enzyme-like 
 cit-r.1   102627004   lariat debranching enzyme 
 gma-u.5   100812726   lariat debranching enzyme 
 vvi-u.5   100264324   lariat debranching enzyme 
 ppo-u.5   7458440   lariat debranching enzyme 
 mtr-u.5   11433508   lariat debranching enzyme 
 sly-u.5   101262023   lariat debranching enzyme 
 sot-r.1   102584487   lariat debranching enzyme 
 nta-r.1   107788506   lariat debranching enzyme 
 nta-r.1   107809977   lariat debranching enzyme 
 osa-u.5   4333963   lariat debranching enzyme-like 
 zma-u.5   100285583   uncharacterized LOC100285583 
 tae-r.2   123090931   lariat debranching enzyme 
 tae-r.2   123087029   lariat debranching enzyme 
 hvu-r.1   123447631   lariat debranching enzyme 
 sbi-r.1   110431703   lariat debranching enzyme 
 bdi-r.1   100845942   lariat debranching enzyme 
 cre-r.1   CHLRE_02g146950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107911043 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911043 (ghi-r.1 coexpression data)

CoexMap"107911043"


ghiLOC107911043 | Entrez gene ID : 107911043    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (384 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008419 [list] [network] RNA lariat debranching enzyme activity  (7 genes)  IEA  
Protein XP_040962339.1 [sequence] [blastp]
XP_040962340.1 [sequence] [blastp]
XP_040962341.1 [sequence] [blastp]
XP_040962342.1 [sequence] [blastp]
XP_040962343.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_040962339.1)
nucl 7,  cyto 1,  plas 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040962340.1)
cyto 7,  nucl 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_040962341.1)
cyto 7,  nucl 2  (predict for XP_040962342.1)
cyto 7,  nucl 2  (predict for XP_040962343.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040962339.1)
other 9  (predict for XP_040962340.1)
other 7,  scret 3  (predict for XP_040962341.1)
other 9  (predict for XP_040962342.1)
other 9  (predict for XP_040962343.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911043
ghi-r.1
for
107930812
ath-u.5
for
DBR1
bra-r.6
for
103862082
bna-r.1
for
106386230
bna-r.1
for
106368694
bna-r.1
for
106420285
cit-r.1
for
102627004
gma-u.5
for
100812726
vvi-u.5
for
100264324
ppo-u.5
for
7458440
mtr-u.5
for
11433508
sly-u.5
for
101262023
sot-r.1
for
102584487
nta-r.1
for
107788506
nta-r.1
for
107809977
osa-u.5
for
4333963
zma-u.5
for
100285583
tae-r.2
for
123090931
tae-r.2
for
123087029
hvu-r.1
for
123447631
sbi-r.1
for
110431703
bdi-r.1
for
100845942
cre-r.1
for
CHLRE_02g146950v5


Ortholog ID: 10239
Species ghi ghi ath bra bna bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107911043 LOC107930812 DBR1 LOC103862082 LOC106386230 LOC106368694 LOC106420285 LOC102627004 LOC100812726 LOC100264324 LOC7458440 LOC11433508 LOC101262023 LOC102584487 LOC107788506 LOC107809977 LOC4333963 LOC100285583 LOC123090931 LOC123087029 LOC123447631 LOC110431703 LOC100845942 CHLRE_02g146950v5
Function* lariat debranching enzyme lariat debranching enzyme debranching enzyme 1 lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme-like lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme-like uncharacterized LOC100285583 lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme lariat debranching enzyme uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 2
osa00562 Inositol phosphate metabolism 2
osa04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03010 Ribosome 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911043 107930812 829305 103862082 106386230 106368694 106420285 102627004 100812726 100264324 7458440 11433508 101262023 102584487 107788506 107809977 4333963 100285583 123090931 123087029 123447631 110431703 100845942 5720530
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