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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911082   uncharacterized LOC107911082 
 ghi-r.1   107923856   uncharacterized LOC107923856 
 ghi-r.1   121223727   uncharacterized LOC121223727 
 ghi-r.1   107922767   uncharacterized LOC107922767 
 ath-u.5   AT3G62200   Putative endonuclease or glycosyl hydrolase 
 bra-r.6   103842045   uncharacterized LOC103842045 
 bna-r.1   125581572   uncharacterized LOC125581572 
 cit-r.1   102623994   hypothetical protein 
 cit-r.1   102621420   uncharacterized LOC102621420 
 gma-u.5   100819329   uncharacterized LOC100819329 
 gma-u.5   100808926   uncharacterized LOC100808926 
 gma-u.5   100794608   uncharacterized LOC100794608 
 vvi-u.5   100253767   uncharacterized LOC100253767 
 vvi-u.5   100242533   uncharacterized LOC100242533 
 ppo-u.5   7478875   uncharacterized LOC7478875 
 ppo-u.5   7465211   uncharacterized LOC7465211 
 ppo-u.5   18098477   uncharacterized LOC18098477 
 mtr-u.5   11427228   uncharacterized LOC11427228 
 mtr-u.5   11425911   meiosis regulator and mRNA stability factor 1 
 sly-u.5   101263469   uncharacterized LOC101263469 
 sly-u.5   101259999   uncharacterized LOC101259999 
 nta-r.1   107811109   uncharacterized LOC107811109 
 nta-r.1   107796831   uncharacterized LOC107796831 
 nta-r.1   107781288   uncharacterized LOC107781288 
 osa-u.5   4344038   uncharacterized LOC4344038 
 zma-u.5   103647883   uncharacterized LOC103647883 
 zma-u.5   103634414   uncharacterized LOC103634414 
 tae-r.2   123187810   uncharacterized LOC123187810 
 tae-r.2   123051931   uncharacterized LOC123051931 
 tae-r.2   123044055   uncharacterized LOC123044055 
 hvu-r.1   123425120   uncharacterized LOC123425120 
 sbi-r.1   8073079   uncharacterized LOC8073079 
 bdi-r.1   100823350   meiosis regulator and mRNA stability factor 1 

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Top 50 coexpressed genes to 107911082 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911082 (ghi-r.1 coexpression data)

CoexMap"107911082"


ghiLOC107911082 | Entrez gene ID : 107911082    
Species ghi ath bra bna cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi sot cre
Paralog 4 1 1 1 2 3 2 3 2 2 3 1 2 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (5166 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (232 genes)  IEA  
GO MF
GO:0004540 [list] [network] RNA nuclease activity  (590 genes)  IEA  
Protein XP_016694464.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  golg 1  (predict for XP_016694464.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016694464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911082
ghi-r.1
for
107923856
ghi-r.1
for
121223727
ghi-r.1
for
107922767
ath-u.5
for
AT3G62200
bra-r.6
for
103842045
bna-r.1
for
125581572
cit-r.1
for
102623994
cit-r.1
for
102621420
gma-u.5
for
100819329
gma-u.5
for
100808926
gma-u.5
for
100794608
vvi-u.5
for
100253767
vvi-u.5
for
100242533
ppo-u.5
for
7478875
ppo-u.5
for
7465211
ppo-u.5
for
18098477
mtr-u.5
for
11427228
mtr-u.5
for
11425911
sly-u.5
for
101263469
sly-u.5
for
101259999
nta-r.1
for
107811109
nta-r.1
for
107796831
nta-r.1
for
107781288
osa-u.5
for
4344038
zma-u.5
for
103647883
zma-u.5
for
103634414
tae-r.2
for
123187810
tae-r.2
for
123051931
tae-r.2
for
123044055
hvu-r.1
for
123425120
sbi-r.1
for
8073079
bdi-r.1
for
100823350


Ortholog ID: 3117
Species ghi ghi ghi ath bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107923856 LOC121223727 LOC107922767 AT3G62200 LOC103842045 LOC125581572 LOC106452001 LOC125578511 LOC102623994 LOC102621420 LOC100819329 LOC100808926 LOC100794384 LOC100253767 LOC100242533 LOC7478875 LOC7465211 LOC18098477 LOC11427228 LOC11425911 LOC101263469 LOC102584209 LOC107811109 LOC107796831 LOC142179584 LOC4344038 LOC103647883 LOC103634414 LOC123187810 LOC123051931 LOC123044055 LOC123425120 LOC8073079 LOC100823350
Function* uncharacterized LOC107923856 uncharacterized LOC121223727 uncharacterized LOC107922767 Putative endonuclease or glycosyl hydrolase uncharacterized LOC103842045 uncharacterized LOC125581572 uncharacterized LOC106452001 uncharacterized LOC125578511 hypothetical protein uncharacterized LOC102621420 uncharacterized LOC100819329 uncharacterized LOC100808926 uncharacterized LOC100794384 uncharacterized LOC100253767 uncharacterized LOC100242533 uncharacterized LOC7478875 uncharacterized LOC7465211 uncharacterized LOC18098477 uncharacterized LOC11427228 meiosis regulator and mRNA stability factor 1 uncharacterized LOC101263469 uncharacterized LOC102584209 uncharacterized LOC107811109 uncharacterized LOC107796831 uncharacterized LOC142179584 uncharacterized LOC4344038 uncharacterized LOC103647883 uncharacterized LOC103634414 uncharacterized LOC123187810 uncharacterized LOC123051931 uncharacterized LOC123044055 uncharacterized LOC123425120 uncharacterized LOC8073079 meiosis regulator and mRNA stability factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo04144 Endocytosis 3
ppo04142 Lysosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa04141 Protein processing in endoplasmic reticulum 2
osa03018 RNA degradation 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107923856 121223727 107922767 825393 103842045 125581572 106452001 125578511 102623994 102621420 100819329 100808926 100794384 100253767 100242533 7478875 7465211 18098477 11427228 11425911 101263469 102584209 107811109 107796831 142179584 4344038 103647883 103634414 123187810 123051931 123044055 123425120 8073079 100823350
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