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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107911089   E3 ubiquitin protein ligase RIN2 
 ghi-r.1   107953639   E3 ubiquitin protein ligase RIN2 
 ghi-r.1   107946848   E3 ubiquitin protein ligase RIN2 
 ghi-r.1   107933504   E3 ubiquitin protein ligase RIN2 
 ath-u.5   RIN2   RPM1 interacting protein 2 
 ath-u.5   RIN3   RPM1 interacting protein 3 
 bra-r.6   103834881   E3 ubiquitin protein ligase RIN2 
 bra-r.6   103861538   E3 ubiquitin protein ligase RIN2 
 bna-r.1   106359865   E3 ubiquitin protein ligase RIN2-like 
 bna-r.1   106374473   E3 ubiquitin protein ligase RIN2-like 
 bna-r.1   106411538   E3 ubiquitin protein ligase RIN2 
 cit-r.1   102629805   E3 ubiquitin protein ligase RIN2 
 gma-u.5   100820578   E3 ubiquitin protein ligase RIN2 
 gma-u.5   100819656   E3 ubiquitin protein ligase RIN2 
 vvi-u.5   100241573   E3 ubiquitin protein ligase RIN2 
 ppo-u.5   7465507   E3 ubiquitin protein ligase RIN2 
 ppo-u.5   7457713   E3 ubiquitin protein ligase RIN2 
 mtr-u.5   11410500   E3 ubiquitin protein ligase RIN2 
 sly-u.5   101247432   E3 ubiquitin protein ligase RIN2 
 sot-r.1   102592947   E3 ubiquitin protein ligase RIN2 
 nta-r.1   107760187   E3 ubiquitin protein ligase RIN2 
 nta-r.1   107770352   E3 ubiquitin protein ligase RIN2 
 osa-u.5   4343241   E3 ubiquitin protein ligase RIN2 
 zma-u.5   100284836   protein binding protein 
 zma-u.5   103633177   E3 ubiquitin protein ligase RIN2 
 tae-r.2   123188480   E3 ubiquitin protein ligase RIN2 
 tae-r.2   123052629   E3 ubiquitin protein ligase RIN2 
 tae-r.2   123044811   E3 ubiquitin protein ligase RIN2 
 hvu-r.1   123426085   E3 ubiquitin protein ligase RIN2-like 
 sbi-r.1   8077439   E3 ubiquitin protein ligase RIN2 
 bdi-r.1   100824161   E3 ubiquitin protein ligase RIN2 

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Top 50 coexpressed genes to 107911089 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107911089 (ghi-r.1 coexpression data)

CoexMap"107911089"


ghiLOC107911089 | Entrez gene ID : 107911089    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO:0034052 [list] [network] positive regulation of plant-type hypersensitive response  (4 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (426 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (2553 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (169 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_040973244.1 [sequence] [blastp]
XP_040973245.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for XP_040973244.1)
plas 6,  vacu 1,  E.R. 1,  golg 1,  E.R._vacu 1  (predict for XP_040973245.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_040973244.1)
scret 8  (predict for XP_040973245.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107911089
ghi-r.1
for
107953639
ghi-r.1
for
107946848
ghi-r.1
for
107933504
ath-u.5
for
RIN2
ath-u.5
for
RIN3
bra-r.6
for
103834881
bra-r.6
for
103861538
bna-r.1
for
106359865
bna-r.1
for
106374473
bna-r.1
for
106411538
cit-r.1
for
102629805
gma-u.5
for
100820578
gma-u.5
for
100819656
vvi-u.5
for
100241573
ppo-u.5
for
7465507
ppo-u.5
for
7457713
mtr-u.5
for
11410500
sly-u.5
for
101247432
sot-r.1
for
102592947
nta-r.1
for
107760187
nta-r.1
for
107770352
osa-u.5
for
4343241
zma-u.5
for
100284836
zma-u.5
for
103633177
tae-r.2
for
123188480
tae-r.2
for
123052629
tae-r.2
for
123044811
hvu-r.1
for
123426085
sbi-r.1
for
8077439
bdi-r.1
for
100824161


Ortholog ID: 6318
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107911089 LOC107946848 LOC107933504 RIN2 RIN3 LOC103834881 LOC103861538 LOC106359865 LOC106374473 LOC106411538 LOC102629805 LOC100820578 LOC100819656 LOC100241573 LOC7465507 LOC7457713 LOC11410500 LOC101247432 LOC102592947 LOC107760187 LOC107770352 LOC4343241 LOC100284836 LOC103633177 LOC123188480 LOC123052629 LOC123044811 LOC123426085 LOC8077439 LOC100824161
Function* E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 RPM1 interacting protein 2 RPM1 interacting protein 3 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2-like E3 ubiquitin protein ligase RIN2-like E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 protein binding protein E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2-like E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 3
ath04141 Protein processing in endoplasmic reticulum 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma03015 mRNA surveillance pathway 2
gma03013 Nucleocytoplasmic transport 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 4
mtr00190 Oxidative phosphorylation 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107911089 107946848 107933504 828626 835219 103834881 103861538 106359865 106374473 106411538 102629805 100820578 100819656 100241573 7465507 7457713 11410500 101247432 102592947 107760187 107770352 4343241 100284836 103633177 123188480 123052629 123044811 123426085 8077439 100824161
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