Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916638   small ribosomal subunit protein S13, mitochondrial 
 ghi-r.1   107962486   small ribosomal subunit protein S13, mitochondrial 
 ath-u.5   AT1G77750   Ribosomal protein S13/S18 family 
 bra-r.6   103853096   small ribosomal subunit protein S13, mitochondrial 
 bra-r.6   103832205   small ribosomal subunit protein S13, mitochondrial 
 bna-r.1   125589172   small ribosomal subunit protein S13, mitochondrial 
 bna-r.1   125587902   small ribosomal subunit protein S13, mitochondrial-like 
 bna-r.1   106412066   small ribosomal subunit protein S13, mitochondrial 
 cit-r.1   102606874   small ribosomal subunit protein S13, mitochondrial 
 gma-u.5   RSP13   ribosomal protein S13 
 ppo-u.5   7463178   small ribosomal subunit protein S13, mitochondrial 
 mtr-u.5   11443905   small ribosomal subunit protein S13, mitochondrial 

close


Top 50 coexpressed genes to 107916638 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107916638 (ghi-r.1 coexpression data)

CoexMap"107916638"


ghiLOC107916638 | Entrez gene ID : 107916638    
Species ghi ath bra bna cit gma ppo mtr cre vvi nta hvu tae bdi osa zma sly sot sbi
Paralog 2 1 2 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (321 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016701440.1 [sequence] [blastp]
XP_016701441.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto_mito 1  (predict for XP_016701440.1)
chlo 6,  mito 2,  cyto_mito 1  (predict for XP_016701441.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016701440.1)
mito 8  (predict for XP_016701441.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916638
ghi-r.1
for
107962486
ath-u.5
for
AT1G77750
bra-r.6
for
103853096
bra-r.6
for
103832205
bna-r.1
for
125589172
bna-r.1
for
125587902
bna-r.1
for
106412066
cit-r.1
for
102606874
gma-u.5
for
RSP13
ppo-u.5
for
7463178
mtr-u.5
for
11443905


Ortholog ID: 13232
Species ghi ghi ath bra bra bna bna bna cit gma ppo mtr
Symbol LOC107916638 LOC107962486 AT1G77750 LOC103853096 LOC103832205 LOC106412066 LOC106397768 LOC106357347 LOC102606874 RSP13 LOC7463178 LOC11443905
Function* small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial Ribosomal protein S13/S18 family small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial-like small ribosomal subunit protein S13, mitochondrial ribosomal protein S13 small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 13
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03410 Base excision repair 3
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03040 Spliceosome 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916638 107962486 844111 103853096 103832205 106412066 106397768 106357347 102606874 100527465 7463178 11443905
The preparation time of this page was 0.1 [sec].