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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463178   small ribosomal subunit protein S13, mitochondrial 
 ppo-r.4   7463178   small ribosomal subunit protein S13, mitochondrial 
 ppo-m.4   7463178   small ribosomal subunit protein S13, mitochondrial 
 gma-u.5   RSP13   ribosomal protein S13 
 mtr-u.5   11443905   small ribosomal subunit protein S13, mitochondrial 
 ath-u.5   AT1G77750   Ribosomal protein S13/S18 family 

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Top 50 coexpressed genes to 7463178 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463178 (ppo-u.5 coexpression data)

CoexMap"7463178"


ppoLOC7463178 | Entrez gene ID : 7463178    
Species ppo gma mtr ath sly sbi nta bra osa cre cit vvi hvu bdi sot zma tae bna ghi
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002302257.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002302257.4)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_002302257.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463178

.
ppo-r.4
for
7463178

.
ppo-m.4
for
7463178

.
gma-u.5
for
RSP13

.
mtr-u.5
for
11443905

.
ath-u.5
for
AT1G77750

.


Ortholog ID: 13232
Species ath gma bra bra ppo mtr ghi ghi bna bna cit
Symbol AT1G77750 RSP13 LOC103853096 LOC103832205 LOC7463178 LOC11443905 LOC107916638 LOC107962486 LOC106412066 LOC106397768 LOC102606874
Function* Ribosomal protein S13/S18 family ribosomal protein S13 small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial small ribosomal subunit protein S13, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03410 Base excision repair 3
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03040 Spliceosome 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 13
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 11
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03008 Ribosome biogenesis in eukaryotes 2
cit00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844111 100527465 103853096 103832205 7463178 11443905 107916638 107962486 106412066 106397768 102606874
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