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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107933175   pentatricopeptide repeat-containing protein At4g37170 
 ghi-r.1   107945306   pentatricopeptide repeat-containing protein At4g37170 
 ath-u.5   AT4G37170   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103864449   pentatricopeptide repeat-containing protein At4g37170 
 bna-r.1   106441267   pentatricopeptide repeat-containing protein At4g37170-like 
 bna-r.1   125608185   pentatricopeptide repeat-containing protein At4g37170-like 
 cit-r.1   102611243   pentatricopeptide repeat-containing protein At4g37170 
 gma-u.5   100782448   pentatricopeptide repeat-containing protein At4g37170 
 vvi-u.5   100251274   pentatricopeptide repeat-containing protein At4g37170 
 mtr-u.5   11427460   pentatricopeptide repeat-containing protein At4g37170 
 sly-u.5   101254733   pentatricopeptide repeat-containing protein At4g37170 
 sot-r.1   102586998   pentatricopeptide repeat-containing protein At4g37170-like 
 nta-r.1   107762515   pentatricopeptide repeat-containing protein At4g37170-like 
 nta-r.1   107826338   pentatricopeptide repeat-containing protein At4g37170-like 
 zma-u.5   100273856   Pentatricopeptide repeat-containing protein 
 bdi-r.1   100829162   pentatricopeptide repeat-containing protein At4g37170 

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Top 50 coexpressed genes to 107933175 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107933175 (ghi-r.1 coexpression data)

CoexMap"107933175"


ghiLOC107933175 | Entrez gene ID : 107933175    
Species ghi ath bra bna cit gma vvi mtr sly sot nta zma bdi sbi osa tae hvu ppo cre
Paralog 2 1 1 2 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016720831.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016720831.2)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_016720831.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107933175
ghi-r.1
for
107945306
ath-u.5
for
AT4G37170
bra-r.6
for
103864449
bna-r.1
for
106441267
bna-r.1
for
125608185
cit-r.1
for
102611243
gma-u.5
for
100782448
vvi-u.5
for
100251274
mtr-u.5
for
11427460
sly-u.5
for
101254733
sot-r.1
for
102586998
nta-r.1
for
107762515
nta-r.1
for
107826338
zma-u.5
for
100273856
bdi-r.1
for
100829162


Ortholog ID: 11386
Species ghi ghi ath bra bna bna cit gma vvi mtr sly sot nta nta zma bdi
Symbol LOC107933175 LOC107945306 AT4G37170 LOC103864449 LOC106441267 LOC125608185 LOC102611243 LOC100782448 LOC100251274 LOC11427460 LOC101254733 LOC102586998 LOC107762515 LOC107826338 LOC100273856 LOC100829162
Function* pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170-like pentatricopeptide repeat-containing protein At4g37170-like pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170 pentatricopeptide repeat-containing protein At4g37170-like pentatricopeptide repeat-containing protein At4g37170-like pentatricopeptide repeat-containing protein At4g37170-like Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g37170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107933175 107945306 829871 103864449 106441267 125608185 102611243 100782448 100251274 11427460 101254733 102586998 107762515 107826338 100273856 100829162
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