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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107935023   protein TIC 21, chloroplastic 
 ghi-r.1   121225671   protein TIC 21, chloroplastic 
 ghi-r.1   107908879   protein TIC 21, chloroplastic 
 ghi-r.1   107894301   protein TIC 21, chloroplastic 
 ath-u.5   TIC21   translocon at inner membrane of chloroplasts 21 
 bra-r.6   103828482   protein TIC 21, chloroplastic 
 bra-r.6   103847988   protein TIC 21, chloroplastic 
 bna-r.1   106432974   protein TIC 21, chloroplastic-like 
 bna-r.1   106371533   protein TIC 21, chloroplastic-like 
 bna-r.1   106446257   protein TIC 21, chloroplastic-like 
 cit-r.1   102608747   protein TIC 21, chloroplastic 
 gma-u.5   100775427   uncharacterized LOC100775427 
 gma-u.5   100807031   protein TIC 21, chloroplastic 
 vvi-u.5   100255605   protein TIC 21, chloroplastic 
 ppo-u.5   7457556   protein TIC 21, chloroplastic 
 ppo-u.5   7465042   protein TIC 21, chloroplastic 
 mtr-u.5   25485416   protein TIC 21, chloroplastic 
 sly-u.5   101252331   protein TIC 21, chloroplastic 
 sot-r.1   102604607   protein TIC 21, chloroplastic 
 nta-r.1   107789455   protein TIC 21, chloroplastic 
 nta-r.1   107816756   protein TIC 21, chloroplastic-like 
 osa-u.5   4341611   protein TIC 21, chloroplastic 
 osa-u.5   4328550   protein TIC 21, chloroplastic 
 zma-u.5   100276397   uncharacterized LOC100276397 
 zma-u.5   100273175   uncharacterized LOC100273175 
 zma-u.5   100276039   Protein TIC 21 chloroplastic 
 tae-r.2   123127222   protein TIC 21, chloroplastic 
 tae-r.2   123136823   protein TIC 21, chloroplastic 
 tae-r.2   123144303   protein TIC 21, chloroplastic 
 hvu-r.1   123402870   protein TIC 21, chloroplastic-like 
 hvu-r.1   123407669   protein TIC 21, chloroplastic-like 
 sbi-r.1   8083497   protein TIC 21, chloroplastic 
 sbi-r.1   8079428   protein TIC 21, chloroplastic 
 bdi-r.1   100830265   protein TIC 21, chloroplastic 
 bdi-r.1   100821506   protein TIC 21, chloroplastic 

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Top 50 coexpressed genes to 107935023 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107935023 (ghi-r.1 coexpression data)

CoexMap"107935023"


ghiLOC107935023 | Entrez gene ID : 107935023    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 1 2 1 1 1 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016723039.2 [sequence] [blastp]
XP_040958122.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 2  (predict for XP_016723039.2)
chlo 8,  plas 2  (predict for XP_040958122.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016723039.2)
chlo 4  (predict for XP_040958122.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107935023
ghi-r.1
for
121225671
ghi-r.1
for
107908879
ghi-r.1
for
107894301
ath-u.5
for
TIC21
bra-r.6
for
103828482
bra-r.6
for
103847988
bna-r.1
for
106432974
bna-r.1
for
106371533
bna-r.1
for
106446257
cit-r.1
for
102608747
gma-u.5
for
100775427
gma-u.5
for
100807031
vvi-u.5
for
100255605
ppo-u.5
for
7457556
ppo-u.5
for
7465042
mtr-u.5
for
25485416
sly-u.5
for
101252331
sot-r.1
for
102604607
nta-r.1
for
107789455
nta-r.1
for
107816756
osa-u.5
for
4341611
osa-u.5
for
4328550
zma-u.5
for
100276397
zma-u.5
for
100273175
zma-u.5
for
100276039
tae-r.2
for
123127222
tae-r.2
for
123136823
tae-r.2
for
123144303
hvu-r.1
for
123402870
hvu-r.1
for
123407669
sbi-r.1
for
8083497
sbi-r.1
for
8079428
bdi-r.1
for
100830265
bdi-r.1
for
100821506


Ortholog ID: 5054
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107935023 LOC107908879 LOC107894301 TIC21 LOC103828482 LOC103847988 LOC106371533 LOC106446257 LOC106431174 LOC102608747 LOC100775427 LOC100807031 LOC100255605 LOC7457556 LOC7465042 LOC25485416 LOC101252331 LOC102604607 LOC107789455 LOC107816756 LOC4341611 LOC4328550 LOC100276397 LOC100273175 LOC100276039 LOC123136823 LOC123144303 LOC123149602 LOC123402870 LOC123407669 LOC8083497 LOC8079428 LOC100830265 LOC100821506
Function* protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic translocon at inner membrane of chloroplasts 21 protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic uncharacterized LOC100775427 protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic protein TIC 21, chloroplastic uncharacterized LOC100276397 uncharacterized LOC100273175 Protein TIC 21 chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic-like protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic protein TIC 21, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra01230 Biosynthesis of amino acids 3
bra00340 Histidine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00340 Histidine metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00340 Histidine metabolism 2
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma01200 Carbon metabolism 3
gma01212 Fatty acid metabolism 3
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma03010 Ribosome 3
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi00010 Glycolysis / Gluconeogenesis 4
vvi00620 Pyruvate metabolism 4
vvi01200 Carbon metabolism 4
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03018 RNA degradation 3
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr00061 Fatty acid biosynthesis 3
mtr01212 Fatty acid metabolism 3
mtr00290 Valine, leucine and isoleucine biosynthesis 2
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly01210 2-Oxocarboxylic acid metabolism 2
sly00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
sot01230 Biosynthesis of amino acids 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 2
tae01230 Biosynthesis of amino acids 2
tae01240 Biosynthesis of cofactors 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00860 Porphyrin metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 7
bdi00250 Alanine, aspartate and glutamate metabolism 3
bdi00300 Lysine biosynthesis 3
bdi00220 Arginine biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107935023 107908879 107894301 816018 103828482 103847988 106371533 106446257 106431174 102608747 100775427 100807031 100255605 7457556 7465042 25485416 101252331 102604607 107789455 107816756 4341611 4328550 100276397 100273175 100276039 123136823 123144303 123149602 123402870 123407669 8083497 8079428 100830265 100821506
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